Protein Family : U2 snRNP auxilliary factor, large subunit, splicing factor 124065257

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  61

61 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29646.t000023 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 6077   29646: 166962-173038
Cucsa.365600 (1 of 1) KOG0120 - Splicing factor U2AF, large subunit (RRM superfamily) C. sativus v1.0 6907   scaffold03611: 3433367-3440273
orange1.1g009052m.g (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN C. sinensis v1.1 4682   scaffold00006: 2587106-2591787
orange1.1g009944m.g (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN C. sinensis v1.1 9360   scaffold00010: 2034068-2043427
AT4G36690 (1 of 1) PTHR23139//PTHR23139:SF61//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED A. thaliana TAIR10 ATU2AF65A 3815   Chr4: 17293947-17297761
AT1G60900 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED A. thaliana TAIR10 4114   Chr1: 22423909-22428022
Thhalv10024786m.g (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN E. salsugineum v1.0 3645   scaffold_1: 1426711-1430355
Thhalv10023361m.g (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN E. salsugineum v1.0 4265   scaffold_8: 3611227-3615491
Ciclev10025221m.g (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN C. clementina v1.0 5189   scaffold_7: 2220639-2225827
Ciclev10014912m.g (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN C. clementina v1.0 9679   scaffold_2: 33276750-33286428
Lus10041725.g (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN L. usitatissimum v1.0 3819   scaffold272: 1485613-1489431
Lus10024026.g (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN L. usitatissimum v1.0 3831   scaffold353: 96327-100157
Gorai.012G005600 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN G. raimondii v2.1 4875   Chr12: 668982-673856
Gorai.008G068800 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN G. raimondii v2.1 4525   Chr08: 11330717-11335241
Gorai.009G311200 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN G. raimondii v2.1 5234   Chr09: 28942848-28948081
Thecc1EG000427 (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED T. cacao v1.1 4980   scaffold_1: 1740504-1745483
Thecc1EG043260 (1 of 1) PTHR23139//PTHR23139:SF61//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED T. cacao v1.1 4963   scaffold_10r: 4830382-4835344
Araha.11209s0004 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN A. halleri v1.1 4100   Scaffold11209: 22860-26959
Araha.18319s0001 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN A. halleri v1.1 3669   Scaffold18319: 14-3682
Cagra.1216s0006 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN C. grandiflora v1.1 4501   Scaffold1216: 26573-31073
Cagra.1695s0032 (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN C. grandiflora v1.1 3608   Scaffold1695: 128436-132043
Glyma.04G255700 (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN G. max Wm82.a2.v1 5687   Chr04: 52206346-52212032
Glyma.06G324000 (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN G. max Wm82.a2.v1 5543   Chr06: 51171477-51177019
Brara.A02501 (1 of 1) PF06495 - Fruit fly transformer protein (Transformer) B. rapa FPsc v1.3 3695   A01: 20322704-20326398
Brara.H01687 (1 of 4) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN B. rapa FPsc v1.3 3287   A08: 16508335-16511621
Bostr.7867s1525 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN B. stricta v1.2 3896   Scaffold7867: 7699561-7703456
Bostr.10040s0121 (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN B. stricta v1.2 4302   Scaffold10040: 1071965-1076266
Medtr2g013130 (1 of 3) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN M. truncatula Mt4.0v1 9741   chr2: 3475903-3485643
Medtr3g005670 (1 of 3) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN M. truncatula Mt4.0v1 6872   chr3: 307107-313978
Medtr4g031680 (1 of 3) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN M. truncatula Mt4.0v1 6995   chr4: 10770195-10777189

61 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29646.m001075 R. communis v0.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 1 5270 Rosid
AT4G36690.1 A. thaliana TAIR10 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
Ciclev10025221m C. clementina v1.0 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
Lus10041725 L. usitatissimum v1.0 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
Gorai.008G068800.1 G. raimondii v2.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5270 Rosid
Gorai.012G005600.1 G. raimondii v2.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5270 Rosid
Araha.11209s0004.1.p A. halleri v1.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
Cagra.1216s0006.1.p C. grandiflora v1.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
Glyma.04G255700.1.p G. max Wm82.a2.v1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
Glyma.06G324000.1.p G. max Wm82.a2.v1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
Bostr.7867s1525.1.p B. stricta v1.2 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
Medtr2g013130.1 M. truncatula Mt4.0v1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5270 Rosid
Medtr4g031680.1 M. truncatula Mt4.0v1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5270 Rosid
Eucgr.I02460.1.p E. grandis v2.0 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 1 5270 Rosid
Prupe.4G044200.1.p P. persica v2.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
Prupe.7G151700.1.p P. persica v2.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
AL2G15600.t4 A. lyrata v2.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
Tp57577_TGAC_v2_mRNA26411 T. pratense v2 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5270 Rosid
Phvul.005G001300.1.p P. vulgaris v2.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 1 5270 Rosid
Potri.004G040900.1.p P. trichocarpa v3.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 4 5270 Rosid
Potri.011G050400.1.p P. trichocarpa v3.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 4 5270 Rosid
Potri.007G028500.2.p P. trichocarpa v3.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 4 5270 Rosid
Potri.005G125500.9.p P. trichocarpa v3.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 4 5270 Rosid
Podel.07G033500.1.p P. deltoides WV94 v2.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
VIT_204s0023g01450.4 V. vinifera v2.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 1 5270 Rosid
MD05G1315100 M. domestica v1.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 4 5270 Rosid
gene30407-v2.0.a2-hybrid.t2 F. vesca v2.0.a2 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
Cucsa.365600.1 C. sativus v1.0 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 1 5270 Rosid
orange1.1g009944m C. sinensis v1.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid
orange1.1g009052m C. sinensis v1.1 124065257 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5270 Rosid