Protein Family : U2 snRNP auxilliary factor, large subunit, splicing factor 122795253

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  92

92 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29646.t000023 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 6077   29646: 166962-173038
Cucsa.365600 (1 of 1) KOG0120 - Splicing factor U2AF, large subunit (RRM superfamily) C. sativus v1.0 6907   scaffold03611: 3433367-3440273
orange1.1g009052m.g (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN C. sinensis v1.1 4682   scaffold00006: 2587106-2591787
orange1.1g009944m.g (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN C. sinensis v1.1 9360   scaffold00010: 2034068-2043427
AT4G36690 (1 of 1) PTHR23139//PTHR23139:SF61//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED A. thaliana TAIR10 ATU2AF65A 3815   Chr4: 17293947-17297761
AT1G60900 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED A. thaliana TAIR10 4114   Chr1: 22423909-22428022
Thhalv10024786m.g (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN E. salsugineum v1.0 3645   scaffold_1: 1426711-1430355
Thhalv10023361m.g (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN E. salsugineum v1.0 4265   scaffold_8: 3611227-3615491
Ciclev10025221m.g (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN C. clementina v1.0 5189   scaffold_7: 2220639-2225827
Ciclev10014912m.g (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN C. clementina v1.0 9679   scaffold_2: 33276750-33286428
Lus10041725.g (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN L. usitatissimum v1.0 3819   scaffold272: 1485613-1489431
Lus10024026.g (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN L. usitatissimum v1.0 3831   scaffold353: 96327-100157
Lus10037299.g (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN L. usitatissimum v1.0 4429   scaffold462: 1201290-1205718
Gorai.012G005600 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN G. raimondii v2.1 4875   Chr12: 668982-673856
Gorai.008G068800 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN G. raimondii v2.1 4525   Chr08: 11330717-11335241
Gorai.009G311200 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN G. raimondii v2.1 5234   Chr09: 28942848-28948081
Thecc1EG000427 (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED T. cacao v1.1 4980   scaffold_1: 1740504-1745483
Thecc1EG043260 (1 of 1) PTHR23139//PTHR23139:SF61//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED T. cacao v1.1 4963   scaffold_10r: 4830382-4835344
Migut.F00418 (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN M. guttatus v2.0 6013   scaffold_6: 1950062-1956074
Migut.F01167 (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN M. guttatus v2.0 6061   scaffold_6: 5708425-5714485
Migut.H01512 (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN M. guttatus v2.0 7641   scaffold_8: 16452176-16459816
Araha.11209s0004 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN A. halleri v1.1 4100   Scaffold11209: 22860-26959
Araha.18319s0001 (1 of 2) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN A. halleri v1.1 3669   Scaffold18319: 14-3682
Cagra.1216s0006 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN C. grandiflora v1.1 4501   Scaffold1216: 26573-31073
Cagra.1695s0032 (1 of 1) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN C. grandiflora v1.1 3608   Scaffold1695: 128436-132043
Glyma.04G255700 (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN G. max Wm82.a2.v1 5687   Chr04: 52206346-52212032
Glyma.06G324000 (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN G. max Wm82.a2.v1 5543   Chr06: 51171477-51177019
Brara.A02501 (1 of 1) PF06495 - Fruit fly transformer protein (Transformer) B. rapa FPsc v1.3 3695   A01: 20322704-20326398
Brara.H01687 (1 of 4) PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN B. rapa FPsc v1.3 3287   A08: 16508335-16511621
Brara.A00201 (1 of 1) KOG0124 - Polypyrimidine tract-binding protein PUF60 (RRM superfamily) B. rapa FPsc v1.3 1942   A01: 1074641-1076582

92 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29646.m001075 R. communis v0.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 1 5272 Eudicot
AT4G36690.1 A. thaliana TAIR10 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5272 Eudicot
Ciclev10025221m C. clementina v1.0 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5272 Eudicot
Lus10041725 L. usitatissimum v1.0 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5272 Eudicot
Lus10037299 L. usitatissimum v1.0 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5272 Eudicot
Gorai.008G068800.1 G. raimondii v2.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5272 Eudicot
Gorai.012G005600.1 G. raimondii v2.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5272 Eudicot
Araha.11209s0004.1.p A. halleri v1.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5272 Eudicot
Cagra.1216s0006.1.p C. grandiflora v1.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5272 Eudicot
Migut.F00418.1.p M. guttatus v2.0 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5272 Eudicot
Glyma.04G255700.1.p G. max Wm82.a2.v1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5272 Eudicot
Glyma.06G324000.1.p G. max Wm82.a2.v1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5272 Eudicot
Bostr.7867s1525.1.p B. stricta v1.2 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5272 Eudicot
Medtr2g013130.1 M. truncatula Mt4.0v1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5272 Eudicot
Medtr4g031680.1 M. truncatula Mt4.0v1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5272 Eudicot
SapurV1A.0255s0140.1.p S. purpurea v1.0 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5272 Eudicot
Eucgr.I02460.1.p E. grandis v2.0 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 1 5272 Eudicot
Prupe.4G044200.1.p P. persica v2.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5272 Eudicot
Prupe.7G151700.1.p P. persica v2.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5272 Eudicot
Kalax.0015s0151.1.p K. laxiflora v1.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 5 5272 Eudicot
Kalax.0750s0011.1.p K. laxiflora v1.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 5 5272 Eudicot
Kalax.0431s0016.1.p K. laxiflora v1.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 5 5272 Eudicot
Aqcoe6G112900.1.p A. coerulea v3.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5272 Eudicot
Aqcoe1G313300.1.p A. coerulea v3.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5272 Eudicot
Aqcoe5G197000.1.p A. coerulea v3.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5272 Eudicot
AL2G15600.t4 A. lyrata v2.1 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5272 Eudicot
Tp57577_TGAC_v2_mRNA26411 T. pratense v2 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 3 5272 Eudicot
DCAR_028095 D. carota v2.0 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5272 Eudicot
Solyc02g062920.2.1 S. lycopersicum ITAG2.4 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 2 5272 Eudicot
AUR62014796-RA C. quinoa v1.0 122795253 U2 snRNP auxilliary factor, large subunit, splicing factor 4 5272 Eudicot