Protein : Cagra.13923s0006.1.p C. grandiflora v1.1

Secondary Identifier:  PAC:28901726 Organism Name:  Capsella grandiflora
Length:  1658   Name:  Cagra.13923s0006.1.p
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Proteins

11 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR012337 Domain Ribonuclease H-like domain
IPR003029 Domain S1 domain
IPR027999 Domain Death-like domain of Spt6
IPR017072 Family Transcription elongation factor Spt6
IPR028231 Domain Transcription elongation factor Spt6, YqgF domain
IPR028088 Domain Helix-turn-helix DNA-binding domain of Spt6
IPR000980 Domain SH2 domain
IPR010994 Domain RuvA domain 2-like
IPR022967 Domain RNA-binding domain, S1
IPR028083 Domain Spt6 acidic, N-terminal domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Cagra.13923s0006.1_CDS 4977   Scaffold13923: 33302-40945 Capsella grandiflora

35 Ontology Annotations

Ontology Term Db Gene/Protein Name
PF14878 PFAM Cagra.13923s0006.1.p
PIRSF036947 PIRSF Cagra.13923s0006.1.p
PS50126 PROFILE Cagra.13923s0006.1.p
SM00316 SMART Cagra.13923s0006.1.p
SSF158832 SSF Cagra.13923s0006.1.p
SSF47781 SSF Cagra.13923s0006.1.p
SSF50249 SSF Cagra.13923s0006.1.p
SSF53098 SSF Cagra.13923s0006.1.p
SSF55550 SSF Cagra.13923s0006.1.p
3.2.1.8 ENZYME Cagra.13923s0006.1.p
G3DSA:3.30.505.10 GENE3D Cagra.13923s0006.1.p
GO:0003676 GO Cagra.13923s0006.1.p
GO:0003677 GO Cagra.13923s0006.1.p
GO:0006357 GO Cagra.13923s0006.1.p
GO:0032784 GO Cagra.13923s0006.1.p
IPR000980 InterPro Cagra.13923s0006.1.p
IPR003029 InterPro Cagra.13923s0006.1.p
IPR010994 InterPro Cagra.13923s0006.1.p
IPR012337 InterPro Cagra.13923s0006.1.p
IPR012340 InterPro Cagra.13923s0006.1.p
IPR017072 InterPro Cagra.13923s0006.1.p
IPR022967 InterPro Cagra.13923s0006.1.p
IPR027999 InterPro Cagra.13923s0006.1.p
IPR028083 InterPro Cagra.13923s0006.1.p
IPR028088 InterPro Cagra.13923s0006.1.p
IPR028231 InterPro Cagra.13923s0006.1.p
K11292 KEGG Cagra.13923s0006.1.p
3.2.1.8-RXN METACYC Cagra.13923s0006.1.p
PTHR10145 PANTHER Cagra.13923s0006.1.p
PTHR10145:SF6 PANTHER Cagra.13923s0006.1.p

0 Pathway Components

0 Pathways