Gene : Cagra.13923s0006 C. grandiflora v1.1
Defline:  (1 of 1) PF14632 - Acidic N-terminal SPT6 (SPT6_acidic) Genomic Order:  6
Name:  ? Cagra.13923s0006 Secondary Identifier:  ? PAC:28901726
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13923s0006 0.5kb upstream 0.5kb upstream 8529 true Scaffold13923: 33073-41601 Capsella grandiflora
Cagra.13923s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold13923: 41102-41601 Capsella grandiflora
Cagra.13923s0006 0.5kb downstream 0.5kb downstream 8529 true Scaffold13923: 32573-41101 Capsella grandiflora
Cagra.13923s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold13923: 32573-33072 Capsella grandiflora
Cagra.13923s0006 1.0kb upstream 1.0kb upstream 9029 true Scaffold13923: 33073-42101 Capsella grandiflora
Cagra.13923s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold13923: 41102-42101 Capsella grandiflora
Cagra.13923s0006 1.0kb downstream 1.0kb downstream 9029 true Scaffold13923: 32073-41101 Capsella grandiflora
Cagra.13923s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold13923: 32073-33072 Capsella grandiflora
Cagra.13923s0006 2.0kb upstream 2.0kb upstream 10029 true Scaffold13923: 33073-43101 Capsella grandiflora
Cagra.13923s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold13923: 41102-43101 Capsella grandiflora
Cagra.13923s0006 2.0kb downstream 2.0kb downstream 10029 true Scaffold13923: 31073-41101 Capsella grandiflora
Cagra.13923s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold13923: 31073-33072 Capsella grandiflora
Cagra.13923s0006 5.0kb upstream 5.0kb upstream 13029 true Scaffold13923: 33073-46101 Capsella grandiflora
Cagra.13923s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold13923: 41102-46101 Capsella grandiflora
Cagra.13923s0006 5.0kb downstream 5.0kb downstream 13029 true Scaffold13923: 28073-41101 Capsella grandiflora
Cagra.13923s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold13923: 28073-33072 Capsella grandiflora
Cagra.13923s0006 10.0kb upstream 10.0kb upstream 18029 true Scaffold13923: 33073-51101 Capsella grandiflora
Cagra.13923s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold13923: 41102-51101 Capsella grandiflora
Cagra.13923s0006 10.0kb downstream 10.0kb downstream 18029 true Scaffold13923: 23073-41101 Capsella grandiflora
Cagra.13923s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold13923: 23073-33072 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360860 5261 Brassicaceae View MSA
123837242 5264 Brassicales-Malvales View MSA
124344276 5266 SBM View MSA
124242204 5268 Malvidae View MSA
124072790 5270 Rosid View MSA
123737056 5271 Pentapetalae View MSA
122788563 5272 Eudicot View MSA
122044627 5273 Angiosperm View MSA
121347900 5274 Embryophyte View MSA
123426736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain