Protein Domain : IPR008080

Type:  Family Name:  Parvalbumin
Description:  Fish allergies are common in Europe, particularly among male children and young adults. Children allergic to fish react variably to different species.Cod is among the most common offenders, while salmon is the one best tolerated. The allergy-eliciting protein has been isolated from the whitemuscle albumin. It is a parvalbumin, designated Allergen M. Parvalbumins are calcium (Ca)-binding proteins of low molecular weight. Like many other Ca-binding proteins, they belong to the EF-hand family characterised by helix-loop-helix (HLH) binding motifs (two helices pack together at an angleof ~90 degrees, separated by a loop region where calcium binds). In the parvalbumin HLH structural motif, calcium is coordinated through one carbonyl oxygen atom and the oxygen-containing side-chains of 5 amino acid residues, or 4 residues and a water molecule[, , ].Initially, parvalbumins were detected in relatively high amounts in lower vertebrate white muscle, where they were thought to be important for fibrerelaxation. They were subsequently found, although in lesser amounts, in the fast twitch skeletal muscles of higher vertebrates, as well as in a varietyof non-muscle tissues, including testis, endocrine glands, skin and specific neurons. There are two distinct phylogenetic lineages: alpha and beta. Mostmuscles contain parvalbumin of only alpha or beta origin. Cod parvalbumin belongs to the beta-lineage and shares significant similarity with parvalbumin of other fish species [, ].Allergen M contains 113 residues, is a homogenous acidic protein and belongs to a group of muscle sarcoplasmic proteins. It carries the major allergenicdeterminants associated with cod sensitivity, which is dependent directly on the linear structure rather than on the molecular conformation. The allergenic activity of allergen M resides in particular epitopes found in three loops: AB (~13-33), CD (~48-64) and EF (~80-103). It has an N-acetylterminal amino acid residue and includes 1 residue of glucose attached to the conserved N-terminal cysteine, and 1 residue each of tyrosine, tryptophan and arginine - the arginine is believed to play a key role in maintaining the tertiary structure. Mutation of the last conservedcoordinating residue of the Ca-binding loop (E101D-motif 4) has also been shown to have a significant impact on the ability of the mutant to obtainthe sevenfold coordination preferred by Ca2+. Short Name:  Parvalbumin

0 Child Features

3 Contains

DB identifier Type Name
IPR002048 Domain EF-hand domain
IPR011992 Domain EF-hand domain pair
IPR018247 Binding_site EF-Hand 1, calcium-binding site

1 Cross References

Identifier
PTHR11653

0 Found In

1 GO Annotation

GO Term Gene Name
GO:0005509 IPR008080

1 Ontology Annotations

GO Term Gene Name
GO:0005509 IPR008080

0 Parent Features

51 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
Araha.4706s0031.1.p PAC:28843743 Arabidopsis halleri 153  
Araha.11551s0025.1.p PAC:28844772 Arabidopsis halleri 150  
Araha.31136s0004.1.p PAC:28850706 Arabidopsis halleri 152  
Glyma.13G159600.1.p C6T8K7 PAC:30500054 Glycine max 229  
Glyma.13G344200.1.p A0A0R0H759 PAC:30504355 Glycine max 184  
Glyma.15G030100.2.p K7M993 PAC:30497489 Glycine max 150  
Glyma.15G030100.1.p A0A0R0G3H9 PAC:30497488 Glycine max 211  
Glyma.19G129800.1.p I1N8R6 PAC:30511879 Glycine max 152  
Brara.D00748.1.p A0A397ZJC3 PAC:30620599 Brassica rapa FPsc 152  
Brara.A03606.1.p A0A398AW29 PAC:30638946 Brassica rapa FPsc 149  
Brara.C03212.1.p A0A398A1I0 PAC:30618617 Brassica rapa FPsc 153  
Brara.G01846.1.p A0A397YMA6 PAC:30632512 Brassica rapa FPsc 203  
Brara.H00492.1.p A0A397Y830 PAC:30649382 Brassica rapa FPsc 152  
Brara.I00219.1.p A0A397XZY6 PAC:30641101 Brassica rapa FPsc 152  
Brara.H02979.1.p A0A397YMW9 PAC:30649387 Brassica rapa FPsc 151  
Brara.I05429.1.p A0A397Y827 PAC:30643302 Brassica rapa FPsc 151  
Bostr.2021s0021.1.p PAC:30676088 Boechera stricta 152  
Bostr.25219s0365.1.p PAC:30671413 Boechera stricta 151  
Medtr4g067270.1 A0A072UWV9 PAC:31108311 Medicago truncatula 150  
SapurV1A.0034s0280.1.p PAC:31425030 Salix purpurea 235  
SapurV1A.0197s0140.1.p PAC:31410933 Salix purpurea 229  
SapurV1A.0071s0640.1.p PAC:31406575 Salix purpurea 152  
Spipo4G0023900 PAC:31504322 Spirodela polyrhiza 180  
Spipo4G0071000 PAC:31503709 Spirodela polyrhiza 152  
evm_27.model.AmTr_v1.0_scaffold00003.219 W1P0E2 PAC:31565405 Amborella trichopoda 157  
evm_27.model.AmTr_v1.0_scaffold00010.500 W1NH42 PAC:31572763 Amborella trichopoda 207  
evm_27.model.AmTr_v1.0_scaffold00041.12 W1PZ29 PAC:31559590 Amborella trichopoda 208  
Eucgr.A00058.1.p A0A059DAQ9 PAC:32045988 Eucalyptus grandis 423  
Eucgr.H00711.1.p A0A059AX29 PAC:32043092 Eucalyptus grandis 152  
Prupe.7G248200.1.p A0A251NGG5 PAC:32102447 Prunus persica 230  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1145128
            2777802
            8845026