Gene : Carub.0151s0002 C. rubella v1.1
Defline:  (1 of 1) 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase Genomic Order:  2
Name:  ? Carub.0151s0002 Secondary Identifier:  ? PAC:39250100
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0151s0002 0.5kb upstream 0.5kb upstream 2758 true scaffold_151: 2160-4917 Capsella rubella
Carub.0151s0002 0.5kb upstream 0.5kb upstream 500 false scaffold_151: 4418-4917 Capsella rubella
Carub.0151s0002 0.5kb downstream 0.5kb downstream 2758 true scaffold_151: 1660-4417 Capsella rubella
Carub.0151s0002 0.5kb downstream 0.5kb downstream 500 false scaffold_151: 1660-2159 Capsella rubella
Carub.0151s0002 1.0kb upstream 1.0kb upstream 3258 true scaffold_151: 2160-5417 Capsella rubella
Carub.0151s0002 1.0kb upstream 1.0kb upstream 1000 false scaffold_151: 4418-5417 Capsella rubella
Carub.0151s0002 1.0kb downstream 1.0kb downstream 3258 true scaffold_151: 1160-4417 Capsella rubella
Carub.0151s0002 1.0kb downstream 1.0kb downstream 1000 false scaffold_151: 1160-2159 Capsella rubella
Carub.0151s0002 2.0kb upstream 2.0kb upstream 4258 true scaffold_151: 2160-6417 Capsella rubella
Carub.0151s0002 2.0kb upstream 2.0kb upstream 2000 false scaffold_151: 4418-6417 Capsella rubella
Carub.0151s0002 2.0kb downstream 2.0kb downstream 4258 true scaffold_151: 160-4417 Capsella rubella
Carub.0151s0002 2.0kb downstream 2.0kb downstream 2000 false scaffold_151: 160-2159 Capsella rubella
Carub.0151s0002 5.0kb upstream 5.0kb upstream 5584 true scaffold_151: 2160-7743 Capsella rubella
Carub.0151s0002 5.0kb upstream 5.0kb upstream 3326 false scaffold_151: 4418-7743 Capsella rubella
Carub.0151s0002 5.0kb downstream 5.0kb downstream 4417 true scaffold_151: 1-4417 Capsella rubella
Carub.0151s0002 5.0kb downstream 5.0kb downstream 2159 false scaffold_151: 1-2159 Capsella rubella
Carub.0151s0002 10.0kb upstream 10.0kb upstream 5584 true scaffold_151: 2160-7743 Capsella rubella
Carub.0151s0002 10.0kb upstream 10.0kb upstream 3326 false scaffold_151: 4418-7743 Capsella rubella
Carub.0151s0002 10.0kb downstream 10.0kb downstream 4417 true scaffold_151: 1-4417 Capsella rubella
Carub.0151s0002 10.0kb downstream 10.0kb downstream 2159 false scaffold_151: 1-2159 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376104 5261 Brassicaceae View MSA
123832827 5264 Brassicales-Malvales View MSA
124321826 5266 SBM View MSA
124237321 5268 Malvidae View MSA
124070022 5270 Rosid View MSA
123738955 5271 Pentapetalae View MSA
122790203 5272 Eudicot View MSA
122046212 5273 Angiosperm View MSA
121345498 5274 Embryophyte View MSA
123427980 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain