Gene : Thecc1EG007256 T. cacao v1.1
Defline:  (1 of 1) 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase Genomic Order:  1147
Name:  ? Thecc1EG007256 Secondary Identifier:  ? PAC:27460046
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007256 0.5kb upstream 0.5kb upstream 5307 true scaffold_2: 6021257-6026563 Theobroma cacao
Thecc1EG007256 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6026064-6026563 Theobroma cacao
Thecc1EG007256 0.5kb downstream 0.5kb downstream 5307 true scaffold_2: 6020757-6026063 Theobroma cacao
Thecc1EG007256 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6020757-6021256 Theobroma cacao
Thecc1EG007256 1.0kb upstream 1.0kb upstream 5807 true scaffold_2: 6021257-6027063 Theobroma cacao
Thecc1EG007256 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6026064-6027063 Theobroma cacao
Thecc1EG007256 1.0kb downstream 1.0kb downstream 5807 true scaffold_2: 6020257-6026063 Theobroma cacao
Thecc1EG007256 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6020257-6021256 Theobroma cacao
Thecc1EG007256 2.0kb upstream 2.0kb upstream 6807 true scaffold_2: 6021257-6028063 Theobroma cacao
Thecc1EG007256 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6026064-6028063 Theobroma cacao
Thecc1EG007256 2.0kb downstream 2.0kb downstream 6807 true scaffold_2: 6019257-6026063 Theobroma cacao
Thecc1EG007256 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6019257-6021256 Theobroma cacao
Thecc1EG007256 5.0kb upstream 5.0kb upstream 9807 true scaffold_2: 6021257-6031063 Theobroma cacao
Thecc1EG007256 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6026064-6031063 Theobroma cacao
Thecc1EG007256 5.0kb downstream 5.0kb downstream 9807 true scaffold_2: 6016257-6026063 Theobroma cacao
Thecc1EG007256 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6016257-6021256 Theobroma cacao
Thecc1EG007256 10.0kb upstream 10.0kb upstream 14807 true scaffold_2: 6021257-6036063 Theobroma cacao
Thecc1EG007256 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6026064-6036063 Theobroma cacao
Thecc1EG007256 10.0kb downstream 10.0kb downstream 14807 true scaffold_2: 6011257-6026063 Theobroma cacao
Thecc1EG007256 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6011257-6021256 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832827 5264 Brassicales-Malvales View MSA
124321826 5266 SBM View MSA
124237321 5268 Malvidae View MSA
124070022 5270 Rosid View MSA
123738955 5271 Pentapetalae View MSA
122790203 5272 Eudicot View MSA
122046212 5273 Angiosperm View MSA
121345498 5274 Embryophyte View MSA
123427980 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain