Gene : Thecc1EG002123 T. cacao v1.1
Defline:  (1 of 2) PTHR31042//PTHR31042:SF2 - FAMILY NOT NAMED // CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Genomic Order:  1730
Name:  ? Thecc1EG002123 Secondary Identifier:  ? PAC:27435163
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002123 0.5kb upstream 0.5kb upstream 5194 true scaffold_1: 11842098-11847291 Theobroma cacao
Thecc1EG002123 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11846792-11847291 Theobroma cacao
Thecc1EG002123 0.5kb downstream 0.5kb downstream 5194 true scaffold_1: 11841598-11846791 Theobroma cacao
Thecc1EG002123 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11841598-11842097 Theobroma cacao
Thecc1EG002123 1.0kb upstream 1.0kb upstream 5694 true scaffold_1: 11842098-11847791 Theobroma cacao
Thecc1EG002123 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11846792-11847791 Theobroma cacao
Thecc1EG002123 1.0kb downstream 1.0kb downstream 5694 true scaffold_1: 11841098-11846791 Theobroma cacao
Thecc1EG002123 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11841098-11842097 Theobroma cacao
Thecc1EG002123 2.0kb upstream 2.0kb upstream 6694 true scaffold_1: 11842098-11848791 Theobroma cacao
Thecc1EG002123 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11846792-11848791 Theobroma cacao
Thecc1EG002123 2.0kb downstream 2.0kb downstream 6694 true scaffold_1: 11840098-11846791 Theobroma cacao
Thecc1EG002123 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11840098-11842097 Theobroma cacao
Thecc1EG002123 5.0kb upstream 5.0kb upstream 9694 true scaffold_1: 11842098-11851791 Theobroma cacao
Thecc1EG002123 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11846792-11851791 Theobroma cacao
Thecc1EG002123 5.0kb downstream 5.0kb downstream 9694 true scaffold_1: 11837098-11846791 Theobroma cacao
Thecc1EG002123 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11837098-11842097 Theobroma cacao
Thecc1EG002123 10.0kb upstream 10.0kb upstream 14694 true scaffold_1: 11842098-11856791 Theobroma cacao
Thecc1EG002123 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11846792-11856791 Theobroma cacao
Thecc1EG002123 10.0kb downstream 10.0kb downstream 14694 true scaffold_1: 11832098-11846791 Theobroma cacao
Thecc1EG002123 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11832098-11842097 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816217 5264 Brassicales-Malvales Singleton cluster - no MSA
124312622 5266 SBM Singleton cluster - no MSA
124249568 5268 Malvidae View MSA
124066667 5270 Rosid View MSA
123753722 5271 Pentapetalae View MSA
122788010 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain