Protein Family : DNA binding protein, putative, expressed 123428085

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  1013

1000 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29747.t000059 (1 of 23) PF02485 - Core-2/I-Branching enzyme (Branch) R. communis v0.1 779   29747: 459644-460422
29747.t000061 (1 of 23) PF02485 - Core-2/I-Branching enzyme (Branch) R. communis v0.1 1540   29747: 466256-467795
29794.t000055 (1 of 2) PTHR31042:SF24 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN R. communis v0.1 3263   29794: 298514-301776
29842.t000043 (1 of 1) PTHR31042//PTHR31042:SF2 - FAMILY NOT NAMED // CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN R. communis v0.1 3526   29842: 241667-245192
29933.t000022 (1 of 23) PF02485 - Core-2/I-Branching enzyme (Branch) R. communis v0.1 4393   29933: 134770-139162
30146.t000014 (1 of 2) PTHR31042:SF24 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN R. communis v0.1 3661   30146: 92105-95765
30198.t000008 (1 of 23) PF02485 - Core-2/I-Branching enzyme (Branch) R. communis v0.1 8186   30198: 161255-169440
30205.t000041 (1 of 23) PF02485 - Core-2/I-Branching enzyme (Branch) R. communis v0.1 2069   30205: 784559-786627
45420.t000002 (1 of 1) PTHR31042:SF16 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN R. communis v0.1 2544   45420: 2324-4867
29685.t000028 (1 of 23) PF02485 - Core-2/I-Branching enzyme (Branch) R. communis v0.1 1031   29685: 238733-239763
28226.t000014 (1 of 11) PF04755 - PAP_fibrillin (PAP_fibrillin) R. communis v0.1 1370   28226: 74758-76127
28226.t000013 (1 of 1) PTHR31042//PTHR31042:SF22 - FAMILY NOT NAMED // CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN R. communis v0.1 2045   28226: 71568-73612
Cucsa.341390 (1 of 3) PTHR31042:SF24 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN C. sativus v1.0 2243   scaffold03356: 3776669-3778911
Cucsa.353190 (1 of 3) PTHR31042:SF24 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN C. sativus v1.0 2618   scaffold03533: 812928-815545
Cucsa.044990 (1 of 2) PTHR31042:SF2 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN C. sativus v1.0 4201   scaffold00542: 1109638-1113838
Cucsa.011340 (1 of 28) PF02485 - Core-2/I-Branching enzyme (Branch) C. sativus v1.0 4442   scaffold00154: 613906-618347
Cucsa.089080 (1 of 11) KOG0799 - Branching enzyme C. sativus v1.0 6423   scaffold00894: 348737-355159
Cucsa.111180 (1 of 28) PF02485 - Core-2/I-Branching enzyme (Branch) C. sativus v1.0 621   scaffold00953: 71991-72611
Cucsa.121570 (1 of 28) PF02485 - Core-2/I-Branching enzyme (Branch) C. sativus v1.0 1587   scaffold00999: 97119-98705
Cucsa.121580 (1 of 3) PTHR31042:SF16 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN C. sativus v1.0 2310   scaffold00999: 100865-103174
Cucsa.114330 (1 of 28) PF02485 - Core-2/I-Branching enzyme (Branch) C. sativus v1.0 2618   scaffold00962: 157803-160420
Cucsa.161880 (1 of 9) PF04755 - PAP_fibrillin (PAP_fibrillin) C. sativus v1.0 3335   scaffold01144: 1661614-1664948
Cucsa.280770 (1 of 3) PTHR31042:SF16 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN C. sativus v1.0 1254   scaffold02633: 684186-685439
orange1.1g015876m.g (1 of 2) PTHR31042:SF16 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN C. sinensis v1.1 2807   scaffold00008: 406004-408810
orange1.1g046575m.g (1 of 1) PTHR31042:SF17 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN C. sinensis v1.1 1889   scaffold00008: 416620-418508
orange1.1g017274m.g (1 of 1) PTHR31042:SF2 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN C. sinensis v1.1 3919   scaffold00007: 1990017-1993935
orange1.1g016099m.g (1 of 2) PTHR31042:SF22 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN C. sinensis v1.1 6878   scaffold00025: 286798-293675
orange1.1g026269m.g (1 of 11) PF04755 - PAP_fibrillin (PAP_fibrillin) C. sinensis v1.1 1992   scaffold00025: 282843-284834
orange1.1g016334m.g (1 of 24) PF02485 - Core-2/I-Branching enzyme (Branch) C. sinensis v1.1 5762   scaffold00050: 166946-172707
orange1.1g040146m.g (1 of 2) PTHR31042:SF24 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN C. sinensis v1.1 2670   scaffold00074: 127979-130648

1000 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29794.m003356 R. communis v0.1 123428085 DNA binding protein, putative, expressed 12 5275 Viridiplantae
29842.m003546 R. communis v0.1 123428085 DNA binding protein, putative, expressed 12 5275 Viridiplantae
29933.m001400 R. communis v0.1 123428085 DNA binding protein, putative, expressed 12 5275 Viridiplantae
30146.m003437 R. communis v0.1 123428085 DNA binding protein, putative, expressed 12 5275 Viridiplantae
30198.m000850 R. communis v0.1 123428085 DNA binding protein, putative, expressed 12 5275 Viridiplantae
30205.m001611 R. communis v0.1 123428085 DNA binding protein, putative, expressed 12 5275 Viridiplantae
45420.m000032 R. communis v0.1 123428085 DNA binding protein, putative, expressed 12 5275 Viridiplantae
29685.m000506 R. communis v0.1 123428085 DNA binding protein, putative, expressed 12 5275 Viridiplantae
28226.m000843 R. communis v0.1 123428085 DNA binding protein, putative, expressed 12 5275 Viridiplantae
28226.m000844 R. communis v0.1 123428085 DNA binding protein, putative, expressed 12 5275 Viridiplantae
29747.m001102 R. communis v0.1 123428085 DNA binding protein, putative, expressed 12 5275 Viridiplantae
29747.m001104 R. communis v0.1 123428085 DNA binding protein, putative, expressed 12 5275 Viridiplantae
Cucsa.161880.1 C. sativus v1.0 123428085 DNA binding protein, putative, expressed 11 5275 Viridiplantae
Cucsa.341390.1 C. sativus v1.0 123428085 DNA binding protein, putative, expressed 11 5275 Viridiplantae
Cucsa.353190.1 C. sativus v1.0 123428085 DNA binding protein, putative, expressed 11 5275 Viridiplantae
Cucsa.044990.1 C. sativus v1.0 123428085 DNA binding protein, putative, expressed 11 5275 Viridiplantae
Cucsa.011340.1 C. sativus v1.0 123428085 DNA binding protein, putative, expressed 11 5275 Viridiplantae
Cucsa.089080.1 C. sativus v1.0 123428085 DNA binding protein, putative, expressed 11 5275 Viridiplantae
Cucsa.111180.1 C. sativus v1.0 123428085 DNA binding protein, putative, expressed 11 5275 Viridiplantae
Cucsa.121570.1 C. sativus v1.0 123428085 DNA binding protein, putative, expressed 11 5275 Viridiplantae
Cucsa.121580.1 C. sativus v1.0 123428085 DNA binding protein, putative, expressed 11 5275 Viridiplantae
Cucsa.114330.1 C. sativus v1.0 123428085 DNA binding protein, putative, expressed 11 5275 Viridiplantae
Cucsa.280770.1 C. sativus v1.0 123428085 DNA binding protein, putative, expressed 11 5275 Viridiplantae
orange1.1g046575m C. sinensis v1.1 123428085 DNA binding protein, putative, expressed 10 5275 Viridiplantae
orange1.1g017274m C. sinensis v1.1 123428085 DNA binding protein, putative, expressed 10 5275 Viridiplantae
orange1.1g016099m C. sinensis v1.1 123428085 DNA binding protein, putative, expressed 10 5275 Viridiplantae
orange1.1g026269m C. sinensis v1.1 123428085 DNA binding protein, putative, expressed 10 5275 Viridiplantae
orange1.1g016334m C. sinensis v1.1 123428085 DNA binding protein, putative, expressed 10 5275 Viridiplantae
orange1.1g040146m C. sinensis v1.1 123428085 DNA binding protein, putative, expressed 10 5275 Viridiplantae
orange1.1g016651m C. sinensis v1.1 123428085 DNA binding protein, putative, expressed 10 5275 Viridiplantae