Protein Domain : IPR006201

Type:  Family Name:  Neurotransmitter-gated ion-channel
Description:  Neurotransmitter ligand-gated ion channels are transmembrane receptor-ion channel complexes that open transiently upon binding of specific ligands, allowing rapid transmission of signals at chemical synapses [, ]. Five of these ion channel receptor families have been shown to form a sequence-related superfamily:Nicotinic acetylcholine receptor (AchR), an excitatory cation channel in vertebrates and invertebrates; in vertebrate motor endplates it is composed of alpha, beta, gamma and delta/epsilon subunits; in neurons it is composed of alpha and non-alpha (or beta) subunits [].Glycine receptor, an inhibitory chloride ion channel composed of alpha and beta subunits [].Gamma-aminobutyric acid (GABA) receptor, an inhibitory chloride ion channel; at least four types of subunits (alpha, beta, gamma and delta) are known [].Serotonin 5HT3 receptor, of which there are seven major types (5HT3-5HT7) [].Glutamate receptor, an excitatory cation channel of which at least three types have been described (kainate, N-methyl-D-aspartate (NMDA) and quisqualate) [].These receptors possess a pentameric structure (made up of varying subunits), surrounding a central pore. All known sequences of subunits from neurotransmitter-gated ion-channels are structurally related. They are composed of a large extracellular glycosylated N-terminal ligand-binding domain, followed by three hydrophobic transmembrane regions which form the ionic channel, followed by an intracellular region of variable length. A fourth hydrophobic region is found at the C-terminal of the sequence [, ].This entry represents the GABA-A, nicotinic, glycine, glutamate and 5HT3 receptors. Short Name:  Neur_channel

5 Child Features

DB identifier Type Name
IPR002394 Family Nicotinic acetylcholine receptor
IPR006028 Family Gamma-aminobutyric acid A receptor/Glycine receptor alpha
IPR015680 Family Glutamate-Gated Chloride Channel
IPR008060 Family Glycine receptor beta
IPR008132 Family 5-hydroxytryptamine 3 receptor

3 Contains

DB identifier Type Name
IPR006029 Domain Neurotransmitter-gated ion-channel transmembrane domain
IPR006202 Domain Neurotransmitter-gated ion-channel ligand-binding domain
IPR018000 Conserved_site Neurotransmitter-gated ion-channel, conserved site

3 Cross Referencess

Identifier
PTHR18945
PR00252
TIGR00860

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0006811 IPR006201
GO:0016021 IPR006201

2 Ontology Annotations

GO Term Gene Name
GO:0006811 IPR006201
GO:0016021 IPR006201

0 Parent Features

13 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
61905 C1FGZ9 PAC:27397397 Micromonas sp RCC299 521  
59323 C1E8C5 PAC:27402350 Micromonas sp RCC299 420  
Cre17.g705050.t1.2 A0A2K3CP75 PAC:30782866 Chlamydomonas reinhardtii 792  
Cre17.g706450.t1.1 A0A2K3CPA5 PAC:30782064 Chlamydomonas reinhardtii 1045  
Cre17.g706200.t1.2 A0A2K3CP94 PAC:30781824 Chlamydomonas reinhardtii 418  
Cre17.g707200.t1.1 A0A2K3CPE0 PAC:30782018 Chlamydomonas reinhardtii 859  
Cre02.g104250.t1.1 A0A2K3E2H7 PAC:30785254 Chlamydomonas reinhardtii 2096  
Bobra.357_1s0001.1.p PAC:40702408 Botryococcus braunii 599  
Bobra.0220s0008.1.p PAC:40703177 Botryococcus braunii 406  
Bobra.0220s0009.1.p PAC:40703196 Botryococcus braunii 405  
Vocar.0021s0103.1.p PAC:32895919 Volvox carteri 888  
Vocar.0021s0140.1.p PAC:32895981 Volvox carteri 793  
Vocar.0338s0001.1.p PAC:32891757 Volvox carteri 445  

7 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1721053
            1846404
            10026168
            18446614
            15383648
            18760291
            15165736