Gene : Phvul.008G039600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31558:SF1 - F7A19.6 PROTEIN-RELATED Genomic Order:  410
Name:  ? Phvul.008G039600 Secondary Identifier:  ? PAC:37159593
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G039600 0.5kb upstream 0.5kb upstream 6455 true Chr08: 3279471-3285925 Phaseolus vulgaris
Phvul.008G039600 0.5kb upstream 0.5kb upstream 500 false Chr08: 3279471-3279970 Phaseolus vulgaris
Phvul.008G039600 0.5kb downstream 0.5kb downstream 6455 true Chr08: 3279971-3286425 Phaseolus vulgaris
Phvul.008G039600 0.5kb downstream 0.5kb downstream 500 false Chr08: 3285926-3286425 Phaseolus vulgaris
Phvul.008G039600 1.0kb upstream 1.0kb upstream 6955 true Chr08: 3278971-3285925 Phaseolus vulgaris
Phvul.008G039600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3278971-3279970 Phaseolus vulgaris
Phvul.008G039600 1.0kb downstream 1.0kb downstream 6955 true Chr08: 3279971-3286925 Phaseolus vulgaris
Phvul.008G039600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3285926-3286925 Phaseolus vulgaris
Phvul.008G039600 2.0kb upstream 2.0kb upstream 7955 true Chr08: 3277971-3285925 Phaseolus vulgaris
Phvul.008G039600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3277971-3279970 Phaseolus vulgaris
Phvul.008G039600 2.0kb downstream 2.0kb downstream 7955 true Chr08: 3279971-3287925 Phaseolus vulgaris
Phvul.008G039600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3285926-3287925 Phaseolus vulgaris
Phvul.008G039600 5.0kb upstream 5.0kb upstream 10955 true Chr08: 3274971-3285925 Phaseolus vulgaris
Phvul.008G039600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3274971-3279970 Phaseolus vulgaris
Phvul.008G039600 5.0kb downstream 5.0kb downstream 10955 true Chr08: 3279971-3290925 Phaseolus vulgaris
Phvul.008G039600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3285926-3290925 Phaseolus vulgaris
Phvul.008G039600 10.0kb upstream 10.0kb upstream 15955 true Chr08: 3269971-3285925 Phaseolus vulgaris
Phvul.008G039600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3269971-3279970 Phaseolus vulgaris
Phvul.008G039600 10.0kb downstream 10.0kb downstream 15955 true Chr08: 3279971-3295925 Phaseolus vulgaris
Phvul.008G039600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3285926-3295925 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301164 5265 Fabidae View MSA
124073265 5270 Rosid View MSA
123751293 5271 Pentapetalae View MSA
122789069 5272 Eudicot View MSA
122042640 5273 Angiosperm View MSA
121348788 5274 Embryophyte View MSA
123427527 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.99976 0.0 26.1758    
cufflinks 0.84339 0.0 6.97519    
cufflinks 0.216845 0.0 1.57628 Low Low
cufflinks 1.44665 0.0 9.39732    
cufflinks 2.5582 0.0 14.109    
cufflinks 0.667304 0.0 2.98476    
cufflinks 27.9592 0.0 130.62 High High
cufflinks 14.392 0.0 70.985    
cufflinks 23.5711 0.0 129.694   High
cufflinks 0.0627461 0.0 0.278764 Low Low
cufflinks 4.53968 0.0 34.9186    

0 Strain