Gene : AL3G31530 A. lyrata v2.1

Defline:  (1 of 1) K16276 - zinc finger protein-like protein (K16276, BTS) Genomic Order:  2051
Name:  ? AL3G31530 Secondary Identifier:  ? PAC:35942734

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G31530 0.5kb upstream 0.5kb upstream 7151   true scaffold_3: 7830985-7838135 Arabidopsis lyrata
AL3G31530 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 7830985-7831484 Arabidopsis lyrata
AL3G31530 0.5kb downstream 0.5kb downstream 7151   true scaffold_3: 7831485-7838635 Arabidopsis lyrata
AL3G31530 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 7838136-7838635 Arabidopsis lyrata
AL3G31530 1.0kb upstream 1.0kb upstream 7651   true scaffold_3: 7830485-7838135 Arabidopsis lyrata
AL3G31530 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 7830485-7831484 Arabidopsis lyrata
AL3G31530 1.0kb downstream 1.0kb downstream 7651   true scaffold_3: 7831485-7839135 Arabidopsis lyrata
AL3G31530 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 7838136-7839135 Arabidopsis lyrata
AL3G31530 2.0kb upstream 2.0kb upstream 8651   true scaffold_3: 7829485-7838135 Arabidopsis lyrata
AL3G31530 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 7829485-7831484 Arabidopsis lyrata
AL3G31530 2.0kb downstream 2.0kb downstream 8651   true scaffold_3: 7831485-7840135 Arabidopsis lyrata
AL3G31530 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 7838136-7840135 Arabidopsis lyrata
AL3G31530 5.0kb upstream 5.0kb upstream 11651   true scaffold_3: 7826485-7838135 Arabidopsis lyrata
AL3G31530 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 7826485-7831484 Arabidopsis lyrata
AL3G31530 5.0kb downstream 5.0kb downstream 11651   true scaffold_3: 7831485-7843135 Arabidopsis lyrata
AL3G31530 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 7838136-7843135 Arabidopsis lyrata
AL3G31530 10.0kb upstream 10.0kb upstream 16651   true scaffold_3: 7821485-7838135 Arabidopsis lyrata
AL3G31530 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 7821485-7831484 Arabidopsis lyrata
AL3G31530 10.0kb downstream 10.0kb downstream 16651   true scaffold_3: 7831485-7848135 Arabidopsis lyrata
AL3G31530 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 7838136-7848135 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375691 5261 Brassicaceae View MSA
123828097 5264 Brassicales-Malvales View MSA
124337291 5266 SBM View MSA
124246106 5268 Malvidae View MSA
124071903 5270 Rosid View MSA
123743413 5271 Pentapetalae View MSA
122790004 5272 Eudicot View MSA
122047208 5273 Angiosperm View MSA
121348001 5274 Embryophyte View MSA
123428436 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain