Protein Family : E3 ubiquitin ligase, putative, expressed 123428436

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  178

174 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29996.t000001 (1 of 1) PTHR21319//PTHR21319:SF0 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 R. communis v0.1 9429   29996: 1890-11318
30066.t000024 (1 of 1) PTHR21319//PTHR21319:SF9 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED R. communis v0.1 11634   30066: 149140-160773
30147.t000323 (1 of 1) PTHR21319:SF17 - ZINC ION BINDING PROTEIN R. communis v0.1 7809   30147: 4217116-4224924
Cucsa.111160 (1 of 1) PTHR21319:SF0 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 C. sativus v1.0 9331   scaffold00953: 43840-53170
Cucsa.197450 (1 of 1) PTHR21319:SF17 - ZINC ION BINDING PROTEIN C. sativus v1.0 7169   scaffold01357: 836402-843570
orange1.1g000881m.g (1 of 1) PTHR21319//PTHR21319:SF9 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 C. sinensis v1.1 9953   scaffold00008: 438452-448404
orange1.1g000906m.g (1 of 1) PTHR21319:SF17 - ZINC ION BINDING PROTEIN C. sinensis v1.1 7284   scaffold00009: 87957-95240
orange1.1g000878m.g (1 of 1) PTHR21319:SF0 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 C. sinensis v1.1 9121   scaffold00389: 70456-79576
AT3G18290 (1 of 1) K16276 - zinc finger protein-like protein (K16276, BTS) A. thaliana TAIR10 BTS 6516   Chr3: 6273995-6280510
AT1G18910 (1 of 2) PTHR21319:SF17 - ZINC ION BINDING PROTEIN A. thaliana TAIR10 5587   Chr1: 6532559-6538145
AT1G74770 (1 of 2) PTHR21319:SF17 - ZINC ION BINDING PROTEIN A. thaliana TAIR10 5264   Chr1: 28089571-28094834
Thhalv10019915m.g (1 of 1) PTHR21319:SF0 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 E. salsugineum v1.0 6320   scaffold_13: 3004088-3010407
Thhalv10006659m.g (1 of 2) PTHR21319:SF17 - ZINC ION BINDING PROTEIN E. salsugineum v1.0 5647   scaffold_5: 8980642-8986288
Thhalv10018022m.g (1 of 2) PTHR21319:SF17 - ZINC ION BINDING PROTEIN E. salsugineum v1.0 6772   scaffold_9: 2570450-2577221
Ciclev10018535m.g (1 of 1) PTHR21319:SF17 - ZINC ION BINDING PROTEIN C. clementina v1.0 7536   scaffold_3: 2404292-2411827
Ciclev10018545m.g (1 of 1) PTHR21319:SF0 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 C. clementina v1.0 9334   scaffold_3: 33990064-33999397
Ciclev10014065m.g (1 of 1) PTHR21319//PTHR21319:SF9 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 C. clementina v1.0 9603   scaffold_2: 28932641-28942243
Lus10005111.g (1 of 2) PTHR21319//PTHR21319:SF9 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 L. usitatissimum v1.0 7730   scaffold1311: 203862-211591
Lus10008628.g (1 of 1) PF01814//PF05495//PF14599 - Hemerythrin HHE cation binding domain (Hemerythrin) // CHY zinc finger (zf-CHY) // Zinc-ribbon (zinc_ribbon_6) L. usitatissimum v1.0 6013   scaffold1686: 210175-216187
Lus10042189.g (1 of 6) PTHR21319:SF17 - ZINC ION BINDING PROTEIN L. usitatissimum v1.0 4310   scaffold123: 1123649-1127958
Lus10042190.g (1 of 1) PF05495//PF13639 - CHY zinc finger (zf-CHY) // Ring finger domain (zf-RING_2) L. usitatissimum v1.0 3532   scaffold123: 1130010-1133541
Lus10034346.g (1 of 2) PTHR21319//PTHR21319:SF9 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 L. usitatissimum v1.0 7738   scaffold310: 781629-789366
Gorai.012G121900 (1 of 1) PTHR21319//PTHR21319:SF9 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 G. raimondii v2.1 11063   Chr12: 27829705-27840767
Gorai.008G190100 (1 of 1) PTHR21319:SF17 - ZINC ION BINDING PROTEIN G. raimondii v2.1 9807   Chr08: 47290641-47300447
Gorai.007G005400 (1 of 1) PTHR21319:SF0 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 G. raimondii v2.1 9074   Chr07: 439610-448683
MicpuC2.EuGene.0000100017 (1 of 1) PTHR21319 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 M. pusilla CCMP1545 v3.0 3532   scaffold_10: 37647-41178
EuGene.1200010024 (1 of 1) PTHR21319 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 M. sp RCC299 v3.0 3084   Chr_12: 1035955-1039038
Thecc1EG009598 (1 of 1) PTHR21319//PTHR21319:SF9 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // SUBFAMILY NOT NAMED T. cacao v1.1 11769   scaffold_2: 25721442-25733210
Thecc1EG012374 (1 of 1) PTHR21319//PTHR21319:SF0 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 T. cacao v1.1 12913   scaffold_3: 2570462-2583374
Thecc1EG013773 (1 of 1) PTHR21319:SF17 - ZINC ION BINDING PROTEIN T. cacao v1.1 18531   scaffold_3: 17014593-17033123

178 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
GSMUA_Achr1P21090_001 M. acuminata v1 123428436 E3 ubiquitin ligase, putative, expressed 4 5275 Viridiplantae
LOC_Os05g47780.1 O. sativa v7.0 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
HanXRQChr08g0213501 H. annuus r1.2 123428436 E3 ubiquitin ligase, putative, expressed 4 5275 Viridiplantae
30147.m014052 R. communis v0.1 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
29996.m000130 R. communis v0.1 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
30066.m000728 R. communis v0.1 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
Cucsa.197450.1 C. sativus v1.0 123428436 E3 ubiquitin ligase, putative, expressed 2 5275 Viridiplantae
Cucsa.111160.1 C. sativus v1.0 123428436 E3 ubiquitin ligase, putative, expressed 2 5275 Viridiplantae
orange1.1g000881m C. sinensis v1.1 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
orange1.1g000878m C. sinensis v1.1 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
orange1.1g000906m C. sinensis v1.1 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
AT3G18290.1 A. thaliana TAIR10 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
AT1G74770.1 A. thaliana TAIR10 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
AT1G18910.1 A. thaliana TAIR10 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
Thhalv10019915m E. salsugineum v1.0 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
Thhalv10018022m E. salsugineum v1.0 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
Thhalv10006659m E. salsugineum v1.0 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
Ciclev10018535m C. clementina v1.0 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
Ciclev10018545m C. clementina v1.0 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
Ciclev10014065m C. clementina v1.0 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
Lus10005111 L. usitatissimum v1.0 123428436 E3 ubiquitin ligase, putative, expressed 5 5275 Viridiplantae
Lus10034346 L. usitatissimum v1.0 123428436 E3 ubiquitin ligase, putative, expressed 5 5275 Viridiplantae
Lus10008628 L. usitatissimum v1.0 123428436 E3 ubiquitin ligase, putative, expressed 5 5275 Viridiplantae
Lus10042189 L. usitatissimum v1.0 123428436 E3 ubiquitin ligase, putative, expressed 5 5275 Viridiplantae
Lus10042190 L. usitatissimum v1.0 123428436 E3 ubiquitin ligase, putative, expressed 5 5275 Viridiplantae
Gorai.008G190100.1 G. raimondii v2.1 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
Gorai.012G121900.1 G. raimondii v2.1 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
Gorai.007G005400.1 G. raimondii v2.1 123428436 E3 ubiquitin ligase, putative, expressed 3 5275 Viridiplantae
50946 M. pusilla CCMP1545 v3.0 123428436 E3 ubiquitin ligase, putative, expressed 1 5275 Viridiplantae
62852 M. sp RCC299 v3.0 123428436 E3 ubiquitin ligase, putative, expressed 1 5275 Viridiplantae