Gene : orange1.1g000878m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR21319:SF0 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  9
Name:  ? orange1.1g000878m.g Secondary Identifier:  ? PAC:18139739
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g000878m.g 0.5kb upstream 0.5kb upstream 9621 true scaffold00389: 69956-79576 Citrus sinensis
orange1.1g000878m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00389: 69956-70455 Citrus sinensis
orange1.1g000878m.g 0.5kb downstream 0.5kb downstream 9621 true scaffold00389: 70456-80076 Citrus sinensis
orange1.1g000878m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00389: 79577-80076 Citrus sinensis
orange1.1g000878m.g 1.0kb upstream 1.0kb upstream 10121 true scaffold00389: 69456-79576 Citrus sinensis
orange1.1g000878m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00389: 69456-70455 Citrus sinensis
orange1.1g000878m.g 1.0kb downstream 1.0kb downstream 10121 true scaffold00389: 70456-80576 Citrus sinensis
orange1.1g000878m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00389: 79577-80576 Citrus sinensis
orange1.1g000878m.g 2.0kb upstream 2.0kb upstream 11121 true scaffold00389: 68456-79576 Citrus sinensis
orange1.1g000878m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00389: 68456-70455 Citrus sinensis
orange1.1g000878m.g 2.0kb downstream 2.0kb downstream 11121 true scaffold00389: 70456-81576 Citrus sinensis
orange1.1g000878m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00389: 79577-81576 Citrus sinensis
orange1.1g000878m.g 5.0kb upstream 5.0kb upstream 14121 true scaffold00389: 65456-79576 Citrus sinensis
orange1.1g000878m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00389: 65456-70455 Citrus sinensis
orange1.1g000878m.g 5.0kb downstream 5.0kb downstream 14121 true scaffold00389: 70456-84576 Citrus sinensis
orange1.1g000878m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00389: 79577-84576 Citrus sinensis
orange1.1g000878m.g 10.0kb upstream 10.0kb upstream 19121 true scaffold00389: 60456-79576 Citrus sinensis
orange1.1g000878m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00389: 60456-70455 Citrus sinensis
orange1.1g000878m.g 10.0kb downstream 10.0kb downstream 19121 true scaffold00389: 70456-89576 Citrus sinensis
orange1.1g000878m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00389: 79577-89576 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337291 5266 SBM View MSA
124246106 5268 Malvidae View MSA
124071903 5270 Rosid View MSA
123743413 5271 Pentapetalae View MSA
122790004 5272 Eudicot View MSA
122047208 5273 Angiosperm View MSA
121348001 5274 Embryophyte View MSA
123428436 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain