Gene : Gorai.013G085600 G. raimondii v2.1
Defline:  (1 of 5) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  856
Name:  ? Gorai.013G085600 Secondary Identifier:  ? PAC:26786836
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G085600 0.5kb upstream 0.5kb upstream 4580 true Chr13: 12740106-12744685 Gossypium raimondii
Gorai.013G085600 0.5kb upstream 0.5kb upstream 500 false Chr13: 12744186-12744685 Gossypium raimondii
Gorai.013G085600 0.5kb downstream 0.5kb downstream 4580 true Chr13: 12739606-12744185 Gossypium raimondii
Gorai.013G085600 0.5kb downstream 0.5kb downstream 500 false Chr13: 12739606-12740105 Gossypium raimondii
Gorai.013G085600 1.0kb upstream 1.0kb upstream 5080 true Chr13: 12740106-12745185 Gossypium raimondii
Gorai.013G085600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 12744186-12745185 Gossypium raimondii
Gorai.013G085600 1.0kb downstream 1.0kb downstream 5080 true Chr13: 12739106-12744185 Gossypium raimondii
Gorai.013G085600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 12739106-12740105 Gossypium raimondii
Gorai.013G085600 2.0kb upstream 2.0kb upstream 6080 true Chr13: 12740106-12746185 Gossypium raimondii
Gorai.013G085600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 12744186-12746185 Gossypium raimondii
Gorai.013G085600 2.0kb downstream 2.0kb downstream 6080 true Chr13: 12738106-12744185 Gossypium raimondii
Gorai.013G085600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 12738106-12740105 Gossypium raimondii
Gorai.013G085600 5.0kb upstream 5.0kb upstream 9080 true Chr13: 12740106-12749185 Gossypium raimondii
Gorai.013G085600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 12744186-12749185 Gossypium raimondii
Gorai.013G085600 5.0kb downstream 5.0kb downstream 9080 true Chr13: 12735106-12744185 Gossypium raimondii
Gorai.013G085600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 12735106-12740105 Gossypium raimondii
Gorai.013G085600 10.0kb upstream 10.0kb upstream 14080 true Chr13: 12740106-12754185 Gossypium raimondii
Gorai.013G085600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 12744186-12754185 Gossypium raimondii
Gorai.013G085600 10.0kb downstream 10.0kb downstream 14080 true Chr13: 12730106-12744185 Gossypium raimondii
Gorai.013G085600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 12730106-12740105 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123813706 5264 Brassicales-Malvales Singleton cluster - no MSA
124310228 5266 SBM Singleton cluster - no MSA
124159723 5268 Malvidae Singleton cluster - no MSA
124070525 5270 Rosid View MSA
123751414 5271 Pentapetalae View MSA
122787187 5272 Eudicot View MSA
122048569 5273 Angiosperm View MSA
121311024 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain