Protein Domain : IPR006183

Type:  Family Name:  6-phosphogluconate dehydrogenase
Description:  This entry represents prokaryotic and eukaryotic 6PGD and a truncated prokaryotic 6PGD that lacks of a central region of about 140 residues, such as yqeC from Bacillus subtilis []. Bacillus subtilis contains three classes of 6-phosphogluconate dehydrogenases (6PGD), including Gnd (YqjI), GntZ and YqeC. All of them are included in this entry. YgjiI is NADP+ dependent, while GntZ and YqeC are NAD+-dependent []. 6-Phosphogluconate dehydrogenase () (6PGD) is a key enzyme that produces NADPH by converting 6-phospho D-gluconolactone to D-ribulose 5-phosphate in the pentose phosphate pathways (PPP) [, ]. NADPH provides the major reducing power required for lipid production and protecting the cell against oxidative stress. 6PGD has been extensively studied with respect to kinetics, regulation, role in pentose-shunt production of NADPH and lipogenesis, and population genetics []. 6PGD is associated with several human disorders including cancer and Alzheimer's disease. The structure of the budding yeast 6PGD (also known as Gnd1) has been revealed []. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet [, ]. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. Short Name:  Pgluconate_DH

2 Child Features

DB identifier Type Name
IPR006113 Family 6-phosphogluconate dehydrogenase, decarboxylating
IPR004849 Family 6-phosphogluconate dehydrogenase, YqeC type

3 Contains

DB identifier Type Name
IPR006115 Domain 6-phosphogluconate dehydrogenase, NADP-binding
IPR002204 Conserved_site 3-hydroxyisobutyrate dehydrogenase-related, conserved site
IPR006184 Binding_site 6-phosphogluconate-binding site

1 Cross References

Identifier
PR00076

0 Found In

1 GO Annotation

GO Term Gene Name
GO:0055114 IPR006183

1 Ontology Annotations

GO Term Gene Name
GO:0055114 IPR006183

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
98399 D8RNJ9 PAC:15413034 Selaginella moellendorffii 491  
416042 D8RXW3 PAC:15420164 Selaginella moellendorffii 320  
168478 D8R545 PAC:15422173 Selaginella moellendorffii 487  
426559 D8SWR6 PAC:15408849 Selaginella moellendorffii 316  
evm.model.supercontig_122.20 PAC:16407067 Carica papaya 495  
evm.model.supercontig_32.50 PAC:16417430 Carica papaya 300  
evm.model.supercontig_70.14 PAC:16425296 Carica papaya 484  
evm.model.supercontig_8.10 PAC:16426375 Carica papaya 290  
29832.m000313 B9SXT4 PAC:16810221 Ricinus communis 488  
29841.m002898 B9RVA7 PAC:16810611 Ricinus communis 495  
29912.m005435 B9RKH5 PAC:16813312 Ricinus communis 290  
30005.m001255 B9SF02 PAC:16815487 Ricinus communis 289  
30071.m000444 B9STG2 PAC:16816709 Ricinus communis 308  
30190.m010775 B9RCL8 PAC:16823143 Ricinus communis 495  
Cucsa.341100.1 A0A0A0LID2 PAC:16979179 Cucumis sativus 311  
Cucsa.049580.1 PAC:16954008 Cucumis sativus 282  
Cucsa.033110.1 PAC:16952527 Cucumis sativus 306  
Cucsa.107160.1 A0A0A0KWX8 PAC:16959563 Cucumis sativus 495  
Cucsa.238400.1 A0A0A0KXM8 PAC:16970715 Cucumis sativus 487  
orange1.1g011394m A0A067DIX6 PAC:18123835 Citrus sinensis 487  
orange1.1g011931m A0A067D7Z8 PAC:18123836 Citrus sinensis 474  
orange1.1g010637m A0A067GM48 PAC:18118611 Citrus sinensis 505  
orange1.1g010652m A0A067GLV0 PAC:18118610 Citrus sinensis 505  
orange1.1g010702m A0A067GCN7 PAC:18118612 Citrus sinensis 503  
orange1.1g011501m A0A067G3F9 PAC:18121762 Citrus sinensis 484  
orange1.1g018747m A0A067FGQ9 PAC:18116611 Citrus sinensis 351  
orange1.1g018694m A0A067FGQ9 PAC:18116612 Citrus sinensis 351  
orange1.1g022834m A0A067EAX1 PAC:18134215 Citrus sinensis 291  
orange1.1g027255m A0A067E758 PAC:18134217 Citrus sinensis 226  
AT5G41670.1 Q9FFR3 PAC:19666714 Arabidopsis thaliana 487  

6 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1659648
            15231785
            6641716
            2113917
            17570834
            24726622