Protein Domain : IPR000178

Type:  Family Name:  Translation initiation factor aIF-2, bacterial-like
Description:  Initiation factor 2 (IF-2) (gene infB) [] is one of the three factorsrequired for the initiation of protein biosynthesis in bacteria. IF-2 promotes the GTP-dependent binding of the initiator tRNA to the small subunitof the ribosome. IF-2 is a protein of about 70 to 95 Kd which contains a central GTP-binding domain flanked by a highly variable N-terminal domain anda more conserved C-terminal domain. Bacterial IF-2 is structurally and functionally related to eukaryoticmitochondrial IF-2 (IF-2(mt)) [] as well as to algal and plants chloroplastIF-2 (IF-2(chl)). Both IF-2(mt) and IF-2(chl) are encoded by nuclear genes and are produced as precursor proteins with a transit peptide. An exception arered algae where IF-2(chl) is encoded by the plastid genome [].This model discriminates eubacterial (and mitochondrial) translation initiation factor 2 (IF-2), encoded by the infB gene in bacteria, from similar proteins in the Archaea and Eukaryotes. In the bacteria and in organelles, the initiator tRNA is charged with N-formyl-Met instead of Met. This translation factor acts in delivering the initator tRNA to the ribosome. It is one of a number of GTP-binding translation factors recognised by the pfam HMM GTP_EFTU. Short Name:  TF_IF2_bacterial-like

0 Child Features

3 Contains

DB identifier Type Name
IPR004161 Domain Translation elongation factor EFTu/EF1A, domain 2
IPR000795 Domain Transcription factor, GTP-binding domain
IPR006847 Domain Translation initiation factor IF-2, N-terminal

3 Cross Referencess

Identifier
PS01176
TIGR00487
MF_00100_B

0 Found In

4 GO Annotations

GO Term Gene Name
GO:0003743 IPR000178
GO:0005525 IPR000178
GO:0006413 IPR000178
GO:0005622 IPR000178

4 Ontology Annotations

GO Term Gene Name
GO:0003743 IPR000178
GO:0005525 IPR000178
GO:0006413 IPR000178
GO:0005622 IPR000178

1 Parent Features

DB identifier Type Name
IPR015760 Family Translation initiation factor IF- 2

913 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
148692 D8RNT4 PAC:15409458 Selaginella moellendorffii 777  
98506 D8RP50 PAC:15414388 Selaginella moellendorffii 597  
evm.model.supercontig_1603.1 PAC:16410173 Carica papaya 541  
evm.model.supercontig_229.4 PAC:16414129 Carica papaya 1017  
30190.m010780 B9RCM3 PAC:16823148 Ricinus communis 458  
29591.m000138 B9T3K8 PAC:16803342 Ricinus communis 1033  
Cucsa.036420.1 PAC:16952681 Cucumis sativus 1023  
Cucsa.036420.2 PAC:16952682 Cucumis sativus 1023  
Cucsa.107170.1 PAC:16959564 Cucumis sativus 514  
orange1.1g008003m A0A067DS85 PAC:18129934 Citrus sinensis 581  
orange1.1g005218m A0A067DIS7 PAC:18129933 Citrus sinensis 708  
orange1.1g001745m A0A067E0G9 PAC:18123841 Citrus sinensis 1018  
orange1.1g001915m A0A067DZF7 PAC:18123842 Citrus sinensis 996  
orange1.1g004746m A0A067DNF7 PAC:18123843 Citrus sinensis 732  
AT4G11160.1 Q67ZW2 PAC:19647704 Arabidopsis thaliana 743  
AT1G17220.1 Q9SHI1 PAC:19656314 Arabidopsis thaliana 1026  
Thhalv10028461m V4LF15 PAC:20197906 Eutrema salsugineum 740  
Thhalv10006681m V4KBK8 PAC:20186041 Eutrema salsugineum 998  
Ciclev10000440m V4V313 PAC:20789408 Citrus clementina 708  
Ciclev10019019m V4TRB0 PAC:20810827 Citrus clementina 734  
Ciclev10018663m V4TWH0 PAC:20810826 Citrus clementina 1018  
Lus10013713 PAC:23169055 Linum usitatissimum 1037  
Lus10005581 PAC:23139652 Linum usitatissimum 962  
Lus10033933 PAC:23154879 Linum usitatissimum 728  
Potri.011G140100.3 A0A2K1YK57 PAC:27002857 Populus trichocarpa 1035  
Potri.011G140100.4 A0A2K1YK57 PAC:27002858 Populus trichocarpa 1035  
Potri.011G140100.5 A0A2K1YK57 PAC:27002859 Populus trichocarpa 1035  
Potri.011G140100.6 PAC:27002861 Populus trichocarpa 485  
Potri.011G140100.2 PAC:27002860 Populus trichocarpa 915  
Potri.011G140100.1 PAC:27002856 Populus trichocarpa 1043  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1805969
            7829522
            8219057