Protein Domain : IPR012302

Type:  Domain Name:  Malic enzyme, NAD-binding
Description:  Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate, a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coliscfA protein; an enzyme from Zea mays(Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiaeprotein YKL029c.Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species.There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known. Short Name:  Malic_NAD-bd

0 Child Features

1 Contains

DB identifier Type Name
IPR015884 Conserved_site Malic enzyme, conserved site

2 Cross Referencess

Identifier
PF03949
SM00919

2 Found Ins

DB identifier Type Name
IPR001891 Family Malic oxidoreductase
IPR012188 Family Malic enzyme, phosphate acetyl/butaryl transferase

3 GO Annotations

GO Term Gene Name
GO:0004471 IPR012302
GO:0051287 IPR012302
GO:0055114 IPR012302

3 Ontology Annotations

GO Term Gene Name
GO:0004471 IPR012302
GO:0051287 IPR012302
GO:0055114 IPR012302

1 Parent Features

DB identifier Type Name
IPR016040 Domain NAD(P)-binding domain

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
431097 D8TBI3 PAC:15420065 Selaginella moellendorffii 280  
142026 D8QX72 PAC:15409499 Selaginella moellendorffii 592  
176472 D8S353 PAC:15423535 Selaginella moellendorffii 618  
130484 D8T2K2 PAC:15421884 Selaginella moellendorffii 592  
428353 D8T2K1 PAC:15413274 Selaginella moellendorffii 410  
evm.model.supercontig_18.186 PAC:16411333 Carica papaya 603  
evm.model.supercontig_25.2 PAC:16414800 Carica papaya 266  
evm.model.supercontig_40.72 PAC:16419477 Carica papaya 581  
evm.model.supercontig_52.65 PAC:16422090 Carica papaya 338  
evm.model.supercontig_7.207 PAC:16425117 Carica papaya 576  
29709.m001210 B9SKH7 PAC:16806427 Ricinus communis 626  
29794.m003406 B9RS07 PAC:16808765 Ricinus communis 588  
29912.m005447 B9RKI6 PAC:16813323 Ricinus communis 591  
30146.m003510 B9RQE8 PAC:16819632 Ricinus communis 641  
30174.m008988 B9RDN0 PAC:16822630 Ricinus communis 602  
Cucsa.363210.2 PAC:16981051 Cucumis sativus 280  
Cucsa.363210.3 PAC:16981052 Cucumis sativus 263  
Cucsa.363210.4 PAC:16981053 Cucumis sativus 263  
Cucsa.030190.1 PAC:16952259 Cucumis sativus 78  
Cucsa.161140.2 A0A0A0LLH9 PAC:16965459 Cucumis sativus 589  
Cucsa.161140.1 PAC:16965458 Cucumis sativus 589  
Cucsa.256990.1 PAC:16972631 Cucumis sativus 626  
Cucsa.256990.2 PAC:16972632 Cucumis sativus 544  
Cucsa.278560.2 PAC:16974156 Cucumis sativus 541  
Cucsa.278560.1 PAC:16974155 Cucumis sativus 635  
Cucsa.288880.2 PAC:16975140 Cucumis sativus 498  
Cucsa.288880.1 A0A0A0LW91 PAC:16975139 Cucumis sativus 591  
Cucsa.361060.2 PAC:16980839 Cucumis sativus 501  
orange1.1g009982m A0A067FGL4 PAC:18116576 Citrus sinensis 521  
orange1.1g009950m A0A067FGL4 PAC:18116577 Citrus sinensis 521  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1911848
            1993674
            8300616
            2103472