Protein Domain : IPR013650

Type:  Domain Name:  ATP-grasp fold, succinyl-CoA synthetase-type
Description:  The ATP-grasp superfamily currently includes 17 groups of enzymes, catalyzing ATP-dependent ligation of a carboxylate containing molecule to an amino orthiol group-containing molecule []. They contribute predominantly to macromolecular synthesis. ATP-hydrolysis is used to activate a substrate. For example, DD-ligase transfers phosphate from ATP to D-alanine on the first step of catalysis. On the second step the resulting acylphosphate is attacked by a second D-alanine to produce a DD dipeptide following phosphate elimination [].The ATP-grasp domain contains three conserved motifs, corresponding to the phosphate binding loop and the Mg(2+) binding site []. The fold is characterised by two alpha-beta subdomains that grasp the ATP molecule between them. Each subdomain provides a variable loop that forms a part of the active site, completed by region of other domains not conserved between the various ATP-grasp enzymes [].The ATP-grasp domain represented by this entry is found primarily in succinyl-CoA synthetases (). Short Name:  ATP-grasp_succ-CoA_synth-type

0 Child Features

1 Contains

DB identifier Type Name
IPR013816 Domain ATP-grasp fold, subdomain 2

1 Cross References

Identifier
PF08442

1 Found In

DB identifier Type Name
IPR005809 Family Succinyl-CoA synthetase, beta subunit

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR011761 Domain ATP-grasp fold

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
419323 D8S8J6 PAC:15408812 Selaginella moellendorffii 432  
164817 D8QRI7 PAC:15413563 Selaginella moellendorffii 423  
evm.model.supercontig_165.35 PAC:16410376 Carica papaya 238  
evm.model.supercontig_48.211 PAC:16420853 Carica papaya 375  
30128.m008967 B9RFP8 PAC:16818552 Ricinus communis 423  
28492.m000465 B9SV11 PAC:16800945 Ricinus communis 425  
29631.m001051 B9SHC9 PAC:16804133 Ricinus communis 423  
Cucsa.394360.2 A0A0A0LKH1 PAC:16983182 Cucumis sativus 423  
Cucsa.394360.3 PAC:16983183 Cucumis sativus 363  
Cucsa.394360.4 PAC:16983184 Cucumis sativus 343  
Cucsa.394360.1 A0A0A0LKH1 PAC:16983181 Cucumis sativus 423  
Cucsa.050870.1 A0A0A0LY92 PAC:16954148 Cucumis sativus 423  
Cucsa.348970.1 A0A0A0KA81 PAC:16979701 Cucumis sativus 421  
orange1.1g014588m A0A067FB34 PAC:18113910 Citrus sinensis 422  
orange1.1g016159m A0A067FAA7 PAC:18113911 Citrus sinensis 394  
orange1.1g022648m A0A067EZ78 PAC:18113912 Citrus sinensis 294  
orange1.1g017966m PAC:18117086 Citrus sinensis 363  
orange1.1g014514m PAC:18117085 Citrus sinensis 423  
orange1.1g019240m A0A067DUX5 PAC:18117087 Citrus sinensis 344  
orange1.1g020234m PAC:18117088 Citrus sinensis 329  
orange1.1g014493m A0A067GRJ4 PAC:18102021 Citrus sinensis 423  
orange1.1g014512m A0A067GRJ4 PAC:18102022 Citrus sinensis 423  
AT1G10670.1 Q9SGY2 PAC:19649178 Arabidopsis thaliana 423  
AT1G09430.1 O80526 PAC:19657673 Arabidopsis thaliana 424  
AT1G60810.1 O22718 PAC:19657002 Arabidopsis thaliana 423  
AT1G10670.4 Q9SGY2 PAC:19649180 Arabidopsis thaliana 423  
AT1G10670.2 Q9SGY2 PAC:19649179 Arabidopsis thaliana 423  
AT1G10670.3 F4I5V8 PAC:19649177 Arabidopsis thaliana 443  
AT2G20420.1 O82662 PAC:19641422 Arabidopsis thaliana 421  
Thhalv10001996m V4MD38 PAC:20200679 Eutrema salsugineum 420  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            7862655
            9416615
            7939684
            8804825