Gene : AT3G29180 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31558:SF1 - F7A19.6 PROTEIN-RELATED Genomic Order:  3098
Name:  ? AT3G29180 Secondary Identifier:  ? PAC:19664196
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G29180 0.5kb upstream 0.5kb upstream 3846 true Chr3: 11147715-11151560 Arabidopsis thaliana
AT3G29180 0.5kb upstream 0.5kb upstream 500 false Chr3: 11147715-11148214 Arabidopsis thaliana
AT3G29180 0.5kb downstream 0.5kb downstream 3846 true Chr3: 11148215-11152060 Arabidopsis thaliana
AT3G29180 0.5kb downstream 0.5kb downstream 500 false Chr3: 11151561-11152060 Arabidopsis thaliana
AT3G29180 1.0kb upstream 1.0kb upstream 4346 true Chr3: 11147215-11151560 Arabidopsis thaliana
AT3G29180 1.0kb upstream 1.0kb upstream 1000 false Chr3: 11147215-11148214 Arabidopsis thaliana
AT3G29180 1.0kb downstream 1.0kb downstream 4346 true Chr3: 11148215-11152560 Arabidopsis thaliana
AT3G29180 1.0kb downstream 1.0kb downstream 1000 false Chr3: 11151561-11152560 Arabidopsis thaliana
AT3G29180 2.0kb upstream 2.0kb upstream 5346 true Chr3: 11146215-11151560 Arabidopsis thaliana
AT3G29180 2.0kb upstream 2.0kb upstream 2000 false Chr3: 11146215-11148214 Arabidopsis thaliana
AT3G29180 2.0kb downstream 2.0kb downstream 5346 true Chr3: 11148215-11153560 Arabidopsis thaliana
AT3G29180 2.0kb downstream 2.0kb downstream 2000 false Chr3: 11151561-11153560 Arabidopsis thaliana
AT3G29180 5.0kb upstream 5.0kb upstream 8346 true Chr3: 11143215-11151560 Arabidopsis thaliana
AT3G29180 5.0kb upstream 5.0kb upstream 5000 false Chr3: 11143215-11148214 Arabidopsis thaliana
AT3G29180 5.0kb downstream 5.0kb downstream 8346 true Chr3: 11148215-11156560 Arabidopsis thaliana
AT3G29180 5.0kb downstream 5.0kb downstream 5000 false Chr3: 11151561-11156560 Arabidopsis thaliana
AT3G29180 10.0kb upstream 10.0kb upstream 13346 true Chr3: 11138215-11151560 Arabidopsis thaliana
AT3G29180 10.0kb upstream 10.0kb upstream 10000 false Chr3: 11138215-11148214 Arabidopsis thaliana
AT3G29180 10.0kb downstream 10.0kb downstream 13346 true Chr3: 11148215-11161560 Arabidopsis thaliana
AT3G29180 10.0kb downstream 10.0kb downstream 10000 false Chr3: 11151561-11161560 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367486 5261 Brassicaceae View MSA
123832023 5264 Brassicales-Malvales View MSA
124342377 5266 SBM View MSA
124248783 5268 Malvidae View MSA
124073265 5270 Rosid View MSA
123751293 5271 Pentapetalae View MSA
122789069 5272 Eudicot View MSA
122042640 5273 Angiosperm View MSA
121348788 5274 Embryophyte View MSA
123427527 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.748        
cufflinks 14.864        
cufflinks 3.801       Low
cufflinks 15.501        
cufflinks 3.972       Low
cufflinks 15.586        

0 Strain