Gene : Eucgr.B02461 E. grandis v2.0
Defline:  (1 of 1) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 Genomic Order:  1962
Name:  ? Eucgr.B02461 Secondary Identifier:  ? PAC:32060239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02461 0.5kb upstream 0.5kb upstream 3680 true Chr02: 44669342-44673021 Eucalyptus grandis
Eucgr.B02461 0.5kb upstream 0.5kb upstream 500 false Chr02: 44672522-44673021 Eucalyptus grandis
Eucgr.B02461 0.5kb downstream 0.5kb downstream 3680 true Chr02: 44668842-44672521 Eucalyptus grandis
Eucgr.B02461 0.5kb downstream 0.5kb downstream 500 false Chr02: 44668842-44669341 Eucalyptus grandis
Eucgr.B02461 1.0kb upstream 1.0kb upstream 4180 true Chr02: 44669342-44673521 Eucalyptus grandis
Eucgr.B02461 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44672522-44673521 Eucalyptus grandis
Eucgr.B02461 1.0kb downstream 1.0kb downstream 4180 true Chr02: 44668342-44672521 Eucalyptus grandis
Eucgr.B02461 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44668342-44669341 Eucalyptus grandis
Eucgr.B02461 2.0kb upstream 2.0kb upstream 5180 true Chr02: 44669342-44674521 Eucalyptus grandis
Eucgr.B02461 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44672522-44674521 Eucalyptus grandis
Eucgr.B02461 2.0kb downstream 2.0kb downstream 5180 true Chr02: 44667342-44672521 Eucalyptus grandis
Eucgr.B02461 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44667342-44669341 Eucalyptus grandis
Eucgr.B02461 5.0kb upstream 5.0kb upstream 8180 true Chr02: 44669342-44677521 Eucalyptus grandis
Eucgr.B02461 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44672522-44677521 Eucalyptus grandis
Eucgr.B02461 5.0kb downstream 5.0kb downstream 8180 true Chr02: 44664342-44672521 Eucalyptus grandis
Eucgr.B02461 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44664342-44669341 Eucalyptus grandis
Eucgr.B02461 10.0kb upstream 10.0kb upstream 13180 true Chr02: 44669342-44682521 Eucalyptus grandis
Eucgr.B02461 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44672522-44682521 Eucalyptus grandis
Eucgr.B02461 10.0kb downstream 10.0kb downstream 13180 true Chr02: 44659342-44672521 Eucalyptus grandis
Eucgr.B02461 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44659342-44669341 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065490 5270 Rosid View MSA
123746583 5271 Pentapetalae View MSA
122790911 5272 Eudicot View MSA
122047376 5273 Angiosperm View MSA
121345088 5274 Embryophyte View MSA
123423767 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.91572 0.0 18.1231   Low
cufflinks 21.9 0.0 50.8247    
cufflinks 11.9419 0.0 29.5576    
cufflinks 17.9059 0.0 42.3973    
cufflinks 21.8976 0.0 51.0154    
cufflinks 14.6658 0.0 35.8389    

0 Strain