Protein Family : LSM domain containing protein, expressed 123423767

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  92

92 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
83281 (1 of 1) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 S. moellendorffii v1.0 618   scaffold_5: 4045880-4046497
30055.t000091 (1 of 1) K12627 - U6 snRNA-associated Sm-like protein LSm8 (LSM8) R. communis v0.1 1476   30055: 451488-452963
Cucsa.122390 (1 of 1) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 C. sativus v1.0 2890   scaffold00999: 635828-638717
orange1.1g034299m.g (1 of 1) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 C. sinensis v1.1 2175   scaffold00105: 166383-168557
AT1G65700 (1 of 1) K12627 - U6 snRNA-associated Sm-like protein LSm8 (LSM8) A. thaliana TAIR10 2092   Chr1: 24434203-24436294
Thhalv10019364m.g (1 of 1) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 E. salsugineum v1.0 2281   scaffold_9: 11022219-11024499
Ciclev10023032m.g (1 of 1) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 C. clementina v1.0 2270   scaffold_3: 18711386-18713655
Lus10028183.g (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 L. usitatissimum v1.0 1139   scaffold327: 398535-399673
Lus10042884.g (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 L. usitatissimum v1.0 1107   scaffold67: 2602843-2603949
Gorai.002G085500 (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 G. raimondii v2.1 2584   Chr02: 10874275-10876858
Gorai.007G313600 (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 G. raimondii v2.1 3277   Chr07: 52721202-52724478
estExt_fgenesh1_pm.C_50105 (1 of 1) PTHR15588 - LSM1 C. subellipsoidea C-169 v2.0 1354   scaffold_5: 1294517-1295870
e_gw1.4.305.1 (1 of 1) KOG1784 - Small Nuclear ribonucleoprotein splicing factor M. pusilla CCMP1545 v3.0 291   scaffold_4: 12177-12467
e_gw2.04.934.1 (1 of 1) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 M. sp RCC299 v3.0 424   Chr_04: 1572526-1572949
eugene.0800010015 (1 of 2) PTHR15588 - LSM1 O. lucimarinus v2.0 419   Chr_8: 28197-28615
Thecc1EG030971 (1 of 1) K12627 - U6 snRNA-associated Sm-like protein LSm8 (LSM8) T. cacao v1.1 2834   scaffold_7: 2300092-2302925
Migut.K01198 (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 M. guttatus v2.0 2592   scaffold_11: 20804936-20807527
Migut.C00419 (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 M. guttatus v2.0 1136   scaffold_3: 10277104-10278239
Cagra.2905s0004 (1 of 1) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 C. grandiflora v1.1 2370   Scaffold2905: 11998-14367
Glyma.08G172900 (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 G. max Wm82.a2.v1 4728   Chr08: 13746182-13750909
Glyma.14G095200 (1 of 3) KOG1784 - Small Nuclear ribonucleoprotein splicing factor G. max Wm82.a2.v1 1955   Chr14: 8850684-8852638
Glyma.15G254600 (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 G. max Wm82.a2.v1 3486   Chr15: 48375357-48378842
Brara.G02607 (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 B. rapa FPsc v1.3 1887   A07: 21492098-21493984
Brara.B01629 (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 B. rapa FPsc v1.3 2129   A02: 9213647-9215775
Bostr.26959s0342 (1 of 1) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 B. stricta v1.2 2277   Scaffold26959: 3328819-3331095
Cre02.g142850 (1 of 1) K12627 - U6 snRNA-associated Sm-like protein LSm8 (LSM8) C. reinhardtii v5.6 SMP11 2640   chromosome_2: 7710153-7712792
Medtr1g085050 (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 M. truncatula Mt4.0v1 688   chr1: 37967704-37968391
Medtr4g084910 (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 M. truncatula Mt4.0v1 3458   chr4: 33145686-33149143
SapurV1A.0042s0490 (1 of 2) K12627 - U6 snRNA-associated Sm-like protein LSm8 (LSM8) S. purpurea v1.0 2450   chr09: 5828096-5830545
SapurV1A.0106s0230 (1 of 2) K12627 - U6 snRNA-associated Sm-like protein LSm8 (LSM8) S. purpurea v1.0 2144   chr16: 15876878-15879021

92 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
83281 S. moellendorffii v1.0 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
30055.m001621 R. communis v0.1 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
Cucsa.122390.1 C. sativus v1.0 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
orange1.1g034299m C. sinensis v1.1 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
AT1G65700.3 A. thaliana TAIR10 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
Thhalv10019364m E. salsugineum v1.0 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
Ciclev10023032m C. clementina v1.0 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
Lus10042884 L. usitatissimum v1.0 123423767 LSM domain containing protein, expressed 2 5275 Viridiplantae
Lus10028183 L. usitatissimum v1.0 123423767 LSM domain containing protein, expressed 2 5275 Viridiplantae
Gorai.002G085500.1 G. raimondii v2.1 123423767 LSM domain containing protein, expressed 2 5275 Viridiplantae
Gorai.007G313600.1 G. raimondii v2.1 123423767 LSM domain containing protein, expressed 2 5275 Viridiplantae
53022 C. subellipsoidea C-169 v2.0 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
153303 M. pusilla CCMP1545 v3.0 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
81280 M. sp RCC299 v3.0 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
32889 O. lucimarinus v2.0 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
Thecc1EG030971t1 T. cacao v1.1 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
Migut.K01198.1.p M. guttatus v2.0 123423767 LSM domain containing protein, expressed 2 5275 Viridiplantae
Migut.C00419.1.p M. guttatus v2.0 123423767 LSM domain containing protein, expressed 2 5275 Viridiplantae
Cagra.2905s0004.1.p C. grandiflora v1.1 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
Glyma.14G095200.1.p G. max Wm82.a2.v1 123423767 LSM domain containing protein, expressed 3 5275 Viridiplantae
Glyma.15G254600.1.p G. max Wm82.a2.v1 123423767 LSM domain containing protein, expressed 3 5275 Viridiplantae
Glyma.08G172900.1.p G. max Wm82.a2.v1 123423767 LSM domain containing protein, expressed 3 5275 Viridiplantae
Brara.B01629.1.p B. rapa FPsc v1.3 123423767 LSM domain containing protein, expressed 2 5275 Viridiplantae
Brara.G02607.1.p B. rapa FPsc v1.3 123423767 LSM domain containing protein, expressed 2 5275 Viridiplantae
Bostr.26959s0342.1.p B. stricta v1.2 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
Cre02.g142850.t1.2 C. reinhardtii v5.6 123423767 LSM domain containing protein, expressed 1 5275 Viridiplantae
Medtr1g085050.1 M. truncatula Mt4.0v1 123423767 LSM domain containing protein, expressed 2 5275 Viridiplantae
Medtr4g084910.1 M. truncatula Mt4.0v1 123423767 LSM domain containing protein, expressed 2 5275 Viridiplantae
SapurV1A.0106s0230.1.p S. purpurea v1.0 123423767 LSM domain containing protein, expressed 2 5275 Viridiplantae
SapurV1A.0042s0490.1.p S. purpurea v1.0 123423767 LSM domain containing protein, expressed 2 5275 Viridiplantae