Protein Family : smr domain containing protein, expressed 123428671

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  161

161 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29851.t000046 (1 of 2) PTHR13308//PTHR13308:SF17 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 R. communis v0.1 8504   29851: 263901-272404
29953.t000005 (1 of 2) PTHR13308//PTHR13308:SF17 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 R. communis v0.1 6256   29953: 50520-56775
29681.t000051 (1 of 1) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) R. communis v0.1 5075   29681: 253804-258878
Cucsa.046170 (1 of 1) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 C. sativus v1.0 7760   scaffold00542: 1750312-1758071
Cucsa.139240 (1 of 3) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) C. sativus v1.0 5941   scaffold01066: 426092-432032
orange1.1g010944m.g (1 of 4) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 C. sinensis v1.1 6060   scaffold00010: 2094837-2100896
orange1.1g043016m.g (1 of 3) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) C. sinensis v1.1 5544   scaffold00026: 611299-616842
AT5G58720 (1 of 4) KOG2401 - Predicted MutS-related protein involved in mismatch repair A. thaliana TAIR10 3436   Chr5: 23719702-23723137
AT3G15390 (1 of 1) PTHR13308//PTHR13308:SF17 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 A. thaliana TAIR10 SDE5 3816   Chr3: 5196522-5200337
Thhalv10020594m.g (1 of 1) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 E. salsugineum v1.0 4180   scaffold_13: 4186675-4190854
Thhalv10013268m.g (1 of 4) KOG2401 - Predicted MutS-related protein involved in mismatch repair E. salsugineum v1.0 3469   scaffold_2: 8766840-8770308
Ciclev10028198m.g (1 of 2) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) C. clementina v1.0 6112   scaffold_8: 24419609-24425720
Ciclev10014995m.g (1 of 7) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 C. clementina v1.0 6293   scaffold_2: 33339098-33345390
Lus10025646.g (1 of 2) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 L. usitatissimum v1.0 4194   scaffold145: 805826-810019
Lus10040668.g (1 of 5) KOG2401 - Predicted MutS-related protein involved in mismatch repair L. usitatissimum v1.0 3415   scaffold156: 943042-946456
Lus10018236.g (1 of 5) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) L. usitatissimum v1.0 3658   scaffold163: 158943-162600
Lus10018188.g (1 of 2) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 L. usitatissimum v1.0 3664   scaffold112: 640772-644435
Gorai.001G116100 (1 of 4) KOG2401 - Predicted MutS-related protein involved in mismatch repair G. raimondii v2.1 5879   Chr01: 13804538-13810416
Gorai.002G072300 (1 of 4) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 G. raimondii v2.1 6615   Chr02: 8457581-8464195
Gorai.006G087000 (1 of 4) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 G. raimondii v2.1 4231   Chr06: 32131990-32136220
Gorai.011G027100 (1 of 4) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 G. raimondii v2.1 4418   Chr11: 1992704-1997121
fgenesh1_pg_4_num_356 (1 of 5) PF01713 - Smr domain (Smr) C. subellipsoidea C-169 v2.0 3184   scaffold_4: 2419916-2423099
fgenesh1_pg_11_num_169 (1 of 2) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) C. subellipsoidea C-169 v2.0 3739   scaffold_11: 1138732-1142470
Thecc1EG029888 (1 of 2) PTHR13308//PTHR13308:SF17 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 T. cacao v1.1 6982   scaffold_6: 24785646-24792627
Thecc1EG031420 (1 of 2) PTHR13308//PTHR13308:SF17 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 T. cacao v1.1 7628   scaffold_7: 4823744-4831371
Thecc1EG041623 (1 of 3) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) T. cacao v1.1 5832   scaffold_9: 38785483-38791314
Migut.M00850 (1 of 1) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 M. guttatus v2.0 5331   scaffold_13: 15580802-15586132
Migut.N00784 (1 of 2) KOG2401 - Predicted MutS-related protein involved in mismatch repair M. guttatus v2.0 7796   scaffold_14: 4552982-4560777
Araha.1906s0016 (1 of 1) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 A. halleri v1.1 2604   Scaffold1906: 55068-57671
Araha.2521s0002 (1 of 4) KOG2401 - Predicted MutS-related protein involved in mismatch repair A. halleri v1.1 3339   Scaffold2521: 2004-5342

161 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29851.m002404 R. communis v0.1 123428671 smr domain containing protein, expressed 3 5275 Viridiplantae
29953.m000428 R. communis v0.1 123428671 smr domain containing protein, expressed 3 5275 Viridiplantae
29681.m001346 R. communis v0.1 123428671 smr domain containing protein, expressed 3 5275 Viridiplantae
Cucsa.139240.1 C. sativus v1.0 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
Cucsa.046170.1 C. sativus v1.0 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
orange1.1g010944m C. sinensis v1.1 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
orange1.1g043016m C. sinensis v1.1 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
AT5G58720.1 A. thaliana TAIR10 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
AT3G15390.1 A. thaliana TAIR10 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
Thhalv10020594m E. salsugineum v1.0 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
Thhalv10013268m E. salsugineum v1.0 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
Ciclev10028198m C. clementina v1.0 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
Ciclev10014995m C. clementina v1.0 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
Lus10018236 L. usitatissimum v1.0 123428671 smr domain containing protein, expressed 4 5275 Viridiplantae
Lus10025646 L. usitatissimum v1.0 123428671 smr domain containing protein, expressed 4 5275 Viridiplantae
Lus10040668 L. usitatissimum v1.0 123428671 smr domain containing protein, expressed 4 5275 Viridiplantae
Lus10018188 L. usitatissimum v1.0 123428671 smr domain containing protein, expressed 4 5275 Viridiplantae
Gorai.006G087000.1 G. raimondii v2.1 123428671 smr domain containing protein, expressed 4 5275 Viridiplantae
Gorai.001G116100.1 G. raimondii v2.1 123428671 smr domain containing protein, expressed 4 5275 Viridiplantae
Gorai.002G072300.1 G. raimondii v2.1 123428671 smr domain containing protein, expressed 4 5275 Viridiplantae
Gorai.011G027100.1 G. raimondii v2.1 123428671 smr domain containing protein, expressed 4 5275 Viridiplantae
40707 C. subellipsoidea C-169 v2.0 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
42961 C. subellipsoidea C-169 v2.0 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
Thecc1EG031420t1 T. cacao v1.1 123428671 smr domain containing protein, expressed 3 5275 Viridiplantae
Thecc1EG029888t2 T. cacao v1.1 123428671 smr domain containing protein, expressed 3 5275 Viridiplantae
Thecc1EG041623t1 T. cacao v1.1 123428671 smr domain containing protein, expressed 3 5275 Viridiplantae
Migut.M00850.1.p M. guttatus v2.0 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
Migut.N00784.1.p M. guttatus v2.0 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
Araha.2521s0002.1.p A. halleri v1.1 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae
Araha.1906s0016.1.p A. halleri v1.1 123428671 smr domain containing protein, expressed 2 5275 Viridiplantae