Protein Family : RNA recognition motif containing protein, putative, expressed 123427736

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  70

70 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
439636 (1 of 1) KOG4207 - Predicted splicing factor, SR protein superfamily S. moellendorffii v1.0 2788   scaffold_7: 2434940-2437727
Cucsa.116130 (1 of 2) KOG0107//KOG0126 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) C. sativus v1.0 4124   scaffold00995: 38808-42931
orange1.1g016463m.g (1 of 4) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) C. sinensis v1.1 4263   scaffold00005: 2771027-2775289
AT5G19960 (1 of 1) KOG0107//KOG0126//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily A. thaliana TAIR10 2414   Chr5: 6743926-6746339
Thhalv10014075m.g (1 of 2) KOG0107//KOG0126 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) E. salsugineum v1.0 2334   scaffold_2: 6889009-6891342
Ciclev10008764m.g (1 of 5) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) C. clementina v1.0 3901   scaffold_1: 5060315-5064215
Lus10017757.g (1 of 2) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily L. usitatissimum v1.0 2869   scaffold212: 409503-412371
Gorai.009G022000 (1 of 1) KOG0107//KOG0126 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) G. raimondii v2.1 3358   Chr09: 1669769-1673126
estExt_fgenesh2_kg.C_60019 (1 of 1) PTHR32343:SF8 - LD29830P M. pusilla CCMP1545 v3.0 1205   scaffold_6: 158018-159222
EuGene.0300010076 (1 of 73) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) M. sp RCC299 v3.0 1425   Chr_03: 142992-144416
Thecc1EG037971 (1 of 2) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily T. cacao v1.1 3778   scaffold_9: 6317727-6321504
Migut.K00484 (1 of 1) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily M. guttatus v2.0 4223   scaffold_11: 2414952-2419174
Araha.13532s0003 (1 of 1) KOG0106//KOG0107//KOG0126//KOG4207 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily A. halleri v1.1 2396   Scaffold13532: 5145-7540
Cagra.1268s0004 (1 of 1) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily C. grandiflora v1.1 2431   Scaffold1268: 11150-13580
Glyma.05G011400 (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. max Wm82.a2.v1 4186   Chr05: 1012793-1016978
Glyma.17G119500 (1 of 7) KOG0121 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) G. max Wm82.a2.v1 4300   Chr17: 9452726-9457025
Brara.B00855 (1 of 14) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) B. rapa FPsc v1.3 2398   A02: 4043267-4045664
Brara.C00901 (1 of 340) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. rapa FPsc v1.3 7973   A03: 4217928-4225900
Bostr.26527s0204 (1 of 1) KOG0107//KOG0126//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily B. stricta v1.2 2551   Scaffold26527: 1310137-1312687
SapurV1A.0246s0180 (1 of 2) KOG0107//KOG0126//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily S. purpurea v1.0 9763   chr18: 7435360-7445122
evm_27.TU.AmTr_v1.0_scaffold00122.63 (1 of 8) KOG4207 - Predicted splicing factor, SR protein superfamily A. trichopoda v1.0 15458   AmTr_v1.0_scaffold00122: 1703165-1718622
Traes_6AS_A2CEF41FA (1 of 4) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily T. aestivum v2.2 4939   ta_iwgsc_6as_v1_4346334: 696-5634
Traes_6BS_70385D0E0 (1 of 4) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily T. aestivum v2.2 5766   ta_iwgsc_6bs_v1_2955975: 1499-7264
Traes_6DS_989682E3C (1 of 4) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily T. aestivum v2.2 5328   ta_iwgsc_6ds_v1_2110941: 609-5936
Prupe.7G236000 (1 of 7) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) P. persica v2.1 3100   Pp07: 20503878-20506977
GSMUA_Achr7G08450_001 (1 of 12) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) M. acuminata v1 8027   chr7: 6301511-6309537
GSMUA_Achr10G28330_001 (1 of 1) KOG0107//KOG0126 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) M. acuminata v1 7563   chr10: 31184616-31192178
Manes.14G127600 (1 of 2) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily M. esculenta v6.1 6006   Chromosome14: 11379600-11385605
Kalax.0245s0012 (1 of 5) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily K. laxiflora v1.1 3793   scaffold_245: 107392-111184
Kalax.0411s0021 (1 of 5) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily K. laxiflora v1.1 3542   scaffold_411: 210843-214384

70 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
439636 S. moellendorffii v1.0 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
Cucsa.116130.1 C. sativus v1.0 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
orange1.1g016463m C. sinensis v1.1 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
AT5G19960.1 A. thaliana TAIR10 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
Thhalv10014075m E. salsugineum v1.0 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
Ciclev10008764m C. clementina v1.0 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
Lus10017757 L. usitatissimum v1.0 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
Gorai.009G022000.1 G. raimondii v2.1 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
127045 M. pusilla CCMP1545 v3.0 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
56648 M. sp RCC299 v3.0 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
Thecc1EG037971t1 T. cacao v1.1 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
Migut.K00484.1.p M. guttatus v2.0 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
Araha.13532s0003.1.p A. halleri v1.1 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
Cagra.1268s0004.1.p C. grandiflora v1.1 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
Glyma.05G011400.1.p G. max Wm82.a2.v1 123427736 RNA recognition motif containing protein, putative, expressed 2 5275 Viridiplantae
Glyma.17G119500.1.p G. max Wm82.a2.v1 123427736 RNA recognition motif containing protein, putative, expressed 2 5275 Viridiplantae
Brara.B00855.1.p B. rapa FPsc v1.3 123427736 RNA recognition motif containing protein, putative, expressed 2 5275 Viridiplantae
Brara.C00901.1.p B. rapa FPsc v1.3 123427736 RNA recognition motif containing protein, putative, expressed 2 5275 Viridiplantae
Bostr.26527s0204.1.p B. stricta v1.2 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
SapurV1A.0246s0180.1.p S. purpurea v1.0 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00122.63 A. trichopoda v1.0 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
Traes_6AS_A2CEF41FA.1 T. aestivum v2.2 123427736 RNA recognition motif containing protein, putative, expressed 3 5275 Viridiplantae
Traes_6BS_70385D0E0.1 T. aestivum v2.2 123427736 RNA recognition motif containing protein, putative, expressed 3 5275 Viridiplantae
Traes_6DS_989682E3C.2 T. aestivum v2.2 123427736 RNA recognition motif containing protein, putative, expressed 3 5275 Viridiplantae
Prupe.7G236000.1.p P. persica v2.1 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
GSMUA_Achr10P28330_001 M. acuminata v1 123427736 RNA recognition motif containing protein, putative, expressed 2 5275 Viridiplantae
GSMUA_Achr7P08450_001 M. acuminata v1 123427736 RNA recognition motif containing protein, putative, expressed 2 5275 Viridiplantae
Manes.14G127600.1.p M. esculenta v6.1 123427736 RNA recognition motif containing protein, putative, expressed 1 5275 Viridiplantae
Kalax.0245s0012.1.p K. laxiflora v1.1 123427736 RNA recognition motif containing protein, putative, expressed 2 5275 Viridiplantae
Kalax.0411s0021.1.p K. laxiflora v1.1 123427736 RNA recognition motif containing protein, putative, expressed 2 5275 Viridiplantae