Protein Family : P-loop containing nucleoside triphosphate hydrolases superfamily protein 123426730

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  101

101 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30074.t000042 (1 of 1) K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28) R. communis v0.1 2493   30074: 314355-316847
Cucsa.031800 (1 of 21) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) C. sativus v1.0 4189   scaffold00429: 1011988-1016176
orange1.1g038133m.g (1 of 22) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) C. sinensis v1.1 2016   scaffold01262: 853-2868
AT1G28180 (1 of 2) K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28) A. thaliana TAIR10 1928   Chr1: 9843075-9845002
AT2G33730 (1 of 2) K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28) A. thaliana TAIR10 2523   Chr2: 14265450-14267972
Thhalv10016306m.g (1 of 28) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) E. salsugineum v1.0 2612   scaffold_10: 7441954-7444565
Thhalv10029441m.g (1 of 24) PF00271//PF04851 - Helicase conserved C-terminal domain (Helicase_C) // Type III restriction enzyme, res subunit (ResIII) E. salsugineum v1.0 1947   scaffold_3: 10612461-10614407
Ciclev10004480m.g (1 of 21) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) C. clementina v1.0 2463   scaffold_9: 13861432-13863894
Lus10015187.g (1 of 42) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) L. usitatissimum v1.0 2142   scaffold866: 443342-445483
Gorai.005G021200 (1 of 33) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) G. raimondii v2.1 2916   Chr05: 1744957-1747872
Gorai.011G148000 (1 of 33) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) G. raimondii v2.1 2017   Chr11: 24134100-24136116
estExt_Genewise1.C_50291 (1 of 18) PF00271//PF04851 - Helicase conserved C-terminal domain (Helicase_C) // Type III restriction enzyme, res subunit (ResIII) C. subellipsoidea C-169 v2.0 5391   scaffold_5: 1481096-1486486
MicpuC2.e_gw1.1.120.1 (1 of 49) PTHR24031 - RNA HELICASE M. pusilla CCMP1545 v3.0 2466   scaffold_1: 1238365-1240830
e_gw2.07.100.1 (1 of 48) PTHR24031 - RNA HELICASE M. sp RCC299 v3.0 2265   Chr_07: 467192-469456
C_Chr_10000089 (1 of 48) PTHR24031 - RNA HELICASE O. lucimarinus v2.0 1770   Chr_10: 325251-327020
Thecc1EG020154 (1 of 1) K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28) T. cacao v1.1 5720   scaffold_4: 26970963-26976682
Migut.K00881 (1 of 29) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) M. guttatus v2.0 4108   scaffold_11: 10554388-10558495
Araha.2637s0005 (1 of 24) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) A. halleri v1.1 1737   Scaffold2637: 15953-17689
Araha.23593s0004 (1 of 24) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) A. halleri v1.1 1923   Scaffold23593: 10178-12100
Cagra.1822s0044 (1 of 24) PF00271//PF04851 - Helicase conserved C-terminal domain (Helicase_C) // Type III restriction enzyme, res subunit (ResIII) C. grandiflora v1.1 1899   Scaffold1822: 179561-181459
Cagra.0301s0010 (1 of 29) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) C. grandiflora v1.1 2474   Scaffold301: 29920-32393
Glyma.07G268900 (1 of 47) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) G. max Wm82.a2.v1 2588   Chr07: 44201243-44203830
Glyma.17G004800 (1 of 47) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) G. max Wm82.a2.v1 2970   Chr17: 468645-471614
Brara.D02052 (1 of 40) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) B. rapa FPsc v1.3 2121   A04: 17031629-17033749
Brara.C01717 (1 of 40) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) B. rapa FPsc v1.3 1926   A03: 8404765-8406690
Bostr.23794s0727 (1 of 27) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) B. stricta v1.2 2763   Scaffold23794: 4109885-4112647
Cre13.g592150 (1 of 1) K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28) C. reinhardtii v5.6 7144   chromosome_13: 4172296-4179439
Medtr4g134170 (1 of 34) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) M. truncatula Mt4.0v1 2483   chr4: 56166694-56169176
SapurV1A.0082s0120 (1 of 1) K12858 - ATP-dependent RNA helicase DDX23/PRP28 (DDX23, PRP28) S. purpurea v1.0 3370   chr12: 3195654-3199023
evm_27.TU.AmTr_v1.0_scaffold00024.321 (1 of 23) PF00270//PF00271 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) A. trichopoda v1.0 2031   AmTr_v1.0_scaffold00024: 6173323-6175353

101 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30074.m001375 R. communis v0.1 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
Cucsa.031800.1 C. sativus v1.0 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
orange1.1g038133m C. sinensis v1.1 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
AT2G33730.1 A. thaliana TAIR10 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
AT1G28180.1 A. thaliana TAIR10 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
Thhalv10029441m E. salsugineum v1.0 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
Thhalv10016306m E. salsugineum v1.0 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
Ciclev10004480m C. clementina v1.0 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
Lus10015187 L. usitatissimum v1.0 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
Gorai.005G021200.1 G. raimondii v2.1 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
Gorai.011G148000.1 G. raimondii v2.1 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
22967 C. subellipsoidea C-169 v2.0 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
13122 M. pusilla CCMP1545 v3.0 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
83331 M. sp RCC299 v3.0 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
94867 O. lucimarinus v2.0 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
Thecc1EG020154t1 T. cacao v1.1 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
Migut.K00881.1.p M. guttatus v2.0 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
Araha.23593s0004.1.p A. halleri v1.1 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
Araha.2637s0005.1.p A. halleri v1.1 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
Cagra.0301s0010.1.p C. grandiflora v1.1 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
Cagra.1822s0044.1.p C. grandiflora v1.1 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
Glyma.07G268900.1.p G. max Wm82.a2.v1 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
Glyma.17G004800.1.p G. max Wm82.a2.v1 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
Brara.C01717.1.p B. rapa FPsc v1.3 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
Brara.D02052.1.p B. rapa FPsc v1.3 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 2 5275 Viridiplantae
Bostr.23794s0727.1.p B. stricta v1.2 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
Cre13.g592150.t1.2 C. reinhardtii v5.6 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
Medtr4g134170.1 M. truncatula Mt4.0v1 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
SapurV1A.0082s0120.1.p S. purpurea v1.0 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00024.321 A. trichopoda v1.0 123426730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 1 5275 Viridiplantae