Protein Family : Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 123426142

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  90

90 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29113.t000001 (1 of 1) PTHR10644//PTHR10644:SF1 - DNA REPAIR/RNA PROCESSING CPSF FAMILY // SPLICING FACTOR 3B SUBUNIT 3 R. communis v0.1 4034   29113: 3822-7855
Cucsa.165660 (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 C. sativus v1.0 5146   scaffold01153: 977543-982688
orange1.1g000944m.g (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 C. sinensis v1.1 4413   scaffold00024: 1025770-1030182
AT3G55220 (1 of 3) K12830 - splicing factor 3B subunit 3 (SF3B3, SAP130, RSE1) A. thaliana TAIR10 4024   Chr3: 20466921-20470944
AT3G55200 (1 of 3) K12830 - splicing factor 3B subunit 3 (SF3B3, SAP130, RSE1) A. thaliana TAIR10 4024   Chr3: 20460533-20464556
Thhalv10006588m.g (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 E. salsugineum v1.0 4198   scaffold_5: 5208000-5212197
Ciclev10030532m.g (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 C. clementina v1.0 5099   scaffold_4: 3249710-3254808
Lus10023443.g (1 of 2) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 L. usitatissimum v1.0 4142   scaffold1216: 212362-216503
Lus10040321.g (1 of 2) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 L. usitatissimum v1.0 3689   scaffold86: 1351314-1355002
Gorai.012G068000 (1 of 2) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 G. raimondii v2.1 4929   Chr12: 9939565-9944493
Gorai.011G245700 (1 of 2) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 G. raimondii v2.1 4725   Chr11: 57190403-57195127
estExt_fgenesh1_pm.C_20263 (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 C. subellipsoidea C-169 v2.0 6786   scaffold_2: 2995155-3001940
estExt_Genewise1.C_11_t20199 (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 M. pusilla CCMP1545 v3.0 3788   scaffold_11: 919033-922820
estExt_fgenesh2_pm.C_Chr_080001 (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 M. sp RCC299 v3.0 3632   Chr_08: 4677-8308
estExt_fgenesh1_pg.C_Chr_60148 (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 O. lucimarinus v2.0 3642   Chr_6: 336687-340328
Thecc1EG042977 (1 of 1) PTHR10644//PTHR10644:SF1 - DNA REPAIR/RNA PROCESSING CPSF FAMILY // SPLICING FACTOR 3B SUBUNIT 3 T. cacao v1.1 5321   scaffold_10r: 3238327-3243647
Migut.J01122 (1 of 1) PTHR10644:SF3 - DNA DAMAGE-BINDING PROTEIN 1 M. guttatus v2.0 3079   scaffold_10: 8352301-8355379
Migut.N02978 (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 M. guttatus v2.0 5325   scaffold_14: 24375276-24380600
Cagra.21692s0001 (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 C. grandiflora v1.1 2954   Scaffold21692: 85-3038
Glyma.10G291300 (1 of 2) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 G. max Wm82.a2.v1 5548   Chr10: 50927153-50932700
Glyma.12G078400 (1 of 11) PTHR10644 - DNA REPAIR/RNA PROCESSING CPSF FAMILY G. max Wm82.a2.v1 3908   Chr12: 6098489-6102396
Glyma.20G240500 (1 of 2) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 G. max Wm82.a2.v1 5566   Chr20: 47172307-47177872
Brara.A03416 (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 B. rapa FPsc v1.3 4170   A01: 28064175-28068344
Bostr.12132s0001 (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 B. stricta v1.2 3932   Scaffold12132: 33-3964
Cre08.g372800 (1 of 1) K12830 - splicing factor 3B subunit 3 (SF3B3, SAP130, RSE1) C. reinhardtii v5.6 14925   chromosome_8: 2591266-2606190
Medtr1g115525 (1 of 4) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 M. truncatula Mt4.0v1 4965   chr1: 52208212-52213176
Medtr6g013290 (1 of 4) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 M. truncatula Mt4.0v1 3500   chr6: 4189472-4192971
SapurV1A.0038s0560 (1 of 1) PTHR10644//PTHR10644:SF1 - DNA REPAIR/RNA PROCESSING CPSF FAMILY // SPLICING FACTOR 3B SUBUNIT 3 S. purpurea v1.0 6357   chr08: 3127567-3133923
evm_27.TU.AmTr_v1.0_scaffold00040.152 (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 A. trichopoda v1.0 12535   AmTr_v1.0_scaffold00040: 2763330-2775864
Traes_6AS_9D53D6DD0 (1 of 3) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 T. aestivum v2.2 6106   ta_iwgsc_6as_v1_4426776: 1880-7985

90 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29113.m000029 R. communis v0.1 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
Cucsa.165660.1 C. sativus v1.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
orange1.1g000944m C. sinensis v1.1 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
AT3G55220.1 A. thaliana TAIR10 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 2 5275 Viridiplantae
AT3G55200.1 A. thaliana TAIR10 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 2 5275 Viridiplantae
Thhalv10006588m E. salsugineum v1.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
Ciclev10030532m C. clementina v1.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
Lus10023443 L. usitatissimum v1.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 2 5275 Viridiplantae
Lus10040321 L. usitatissimum v1.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 2 5275 Viridiplantae
Gorai.012G068000.1 G. raimondii v2.1 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 2 5275 Viridiplantae
Gorai.011G245700.1 G. raimondii v2.1 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 2 5275 Viridiplantae
52476 C. subellipsoidea C-169 v2.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
172670 M. pusilla CCMP1545 v3.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
107017 M. sp RCC299 v3.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
24669 O. lucimarinus v2.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
Thecc1EG042977t1 T. cacao v1.1 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
Migut.J01122.1.p M. guttatus v2.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 2 5275 Viridiplantae
Migut.N02978.1.p M. guttatus v2.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 2 5275 Viridiplantae
Cagra.21692s0001.1.p C. grandiflora v1.1 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
Glyma.10G291300.1.p G. max Wm82.a2.v1 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 3 5275 Viridiplantae
Glyma.12G078400.1.p G. max Wm82.a2.v1 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 3 5275 Viridiplantae
Glyma.20G240500.1.p G. max Wm82.a2.v1 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 3 5275 Viridiplantae
Brara.A03416.1.p B. rapa FPsc v1.3 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
Bostr.12132s0001.1.p B. stricta v1.2 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
Cre08.g372800.t1.1 C. reinhardtii v5.6 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
Medtr1g115525.1 M. truncatula Mt4.0v1 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 2 5275 Viridiplantae
Medtr6g013290.1 M. truncatula Mt4.0v1 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 2 5275 Viridiplantae
SapurV1A.0038s0560.1.p S. purpurea v1.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00040.152 A. trichopoda v1.0 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae
Traes_6AS_9D53D6DD0.1 T. aestivum v2.2 123426142 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 1 5275 Viridiplantae