Protein Family : squalene synthase 1 123424778

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  88

88 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
96714 (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase S. moellendorffii v1.0 1756   scaffold_18: 1557854-1559609
30131.t000268 (1 of 1) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) R. communis v0.1 8291   30131: 1652982-1661272
Cucsa.109210 (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase C. sativus v1.0 5487   scaffold00934: 122945-128431
orange1.1g015087m.g (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase C. sinensis v1.1 8097   scaffold00474: 15032-23128
AT4G34640 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase A. thaliana TAIR10 SQS1 3645   Chr4: 16538282-16541926
Thhalv10025338m.g (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase E. salsugineum v1.0 3815   scaffold_1: 2285479-2289293
Ciclev10028537m.g (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase C. clementina v1.0 7446   scaffold_8: 6315013-6322458
Lus10017499.g (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase L. usitatissimum v1.0 4189   scaffold1253: 258275-262463
Lus10028786.g (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase L. usitatissimum v1.0 4387   scaffold540: 263541-267927
Gorai.002G004400 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase G. raimondii v2.1 4718   Chr02: 242843-247560
Gorai.005G247700 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase G. raimondii v2.1 5719   Chr05: 62755408-62761126
fgenesh1_pm_2_num_294 (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase C. subellipsoidea C-169 v2.0 2082   scaffold_2: 3292239-3294320
e_gw1.4.222.1 (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase M. pusilla CCMP1545 v3.0 1365   scaffold_4: 477044-478408
est_cluster_kg.Chr_04__111__3199617:1 (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase M. sp RCC299 v3.0 1569   Chr_04: 1126827-1128395
eugene.0400010220 (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase O. lucimarinus v2.0 1511   Chr_4: 378705-380215
Thecc1EG006798 (1 of 1) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) T. cacao v1.1 28808   scaffold_2: 3794466-3823273
Migut.N01273 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase M. guttatus v2.0 6174   scaffold_14: 9104942-9111115
Migut.B00185 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase M. guttatus v2.0 6382   scaffold_2: 763941-770322
Araha.10294s0012 (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase A. halleri v1.1 3664   Scaffold10294: 44378-48041
Cagra.2350s0014 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase C. grandiflora v1.1 3771   Scaffold2350: 42430-46200
Glyma.11G112000 (1 of 3) 2.5.1.21 - Squalene synthase / Squalene synthetase G. max Wm82.a2.v1 7144   Chr11: 8534994-8542137
Glyma.12G038200 (1 of 3) 2.5.1.21 - Squalene synthase / Squalene synthetase G. max Wm82.a2.v1 6417   Chr12: 2750945-2757361
Brara.H01190 (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase B. rapa FPsc v1.3 3349   A08: 13438744-13442092
Brara.K00336 (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase B. rapa FPsc v1.3 2432   Scaffold14751: 213149-215580
Brara.A00359 (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase B. rapa FPsc v1.3 4015   A01: 1829667-1833681
Bostr.7867s1325 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase B. stricta v1.2 3765   Scaffold7867: 6733377-6737141
Cre03.g175250 (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase C. reinhardtii v5.6 SQS1 5302   chromosome_3: 4366665-4371966
Medtr4g071520 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase M. truncatula Mt4.0v1 7109   chr4: 27032938-27040046
SapurV1A.0379s0070 (1 of 2) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) S. purpurea v1.0 5748   chr09: 10251729-10257476
SapurV1A.0091s0310 (1 of 2) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) S. purpurea v1.0 6053   chr04: 13955637-13961689

88 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
96714 S. moellendorffii v1.0 123424778 squalene synthase 1 1 5275 Viridiplantae
30131.m007117 R. communis v0.1 123424778 squalene synthase 1 1 5275 Viridiplantae
Cucsa.109210.1 C. sativus v1.0 123424778 squalene synthase 1 1 5275 Viridiplantae
orange1.1g015087m C. sinensis v1.1 123424778 squalene synthase 1 1 5275 Viridiplantae
AT4G34640.1 A. thaliana TAIR10 123424778 squalene synthase 1 1 5275 Viridiplantae
Thhalv10025338m E. salsugineum v1.0 123424778 squalene synthase 1 1 5275 Viridiplantae
Ciclev10028537m C. clementina v1.0 123424778 squalene synthase 1 1 5275 Viridiplantae
Lus10017499 L. usitatissimum v1.0 123424778 squalene synthase 1 2 5275 Viridiplantae
Lus10028786 L. usitatissimum v1.0 123424778 squalene synthase 1 2 5275 Viridiplantae
Gorai.005G247700.1 G. raimondii v2.1 123424778 squalene synthase 1 2 5275 Viridiplantae
Gorai.002G004400.1 G. raimondii v2.1 123424778 squalene synthase 1 2 5275 Viridiplantae
35284 C. subellipsoidea C-169 v2.0 123424778 squalene synthase 1 1 5275 Viridiplantae
154139 M. pusilla CCMP1545 v3.0 123424778 squalene synthase 1 1 5275 Viridiplantae
108133 M. sp RCC299 v3.0 123424778 squalene synthase 1 1 5275 Viridiplantae
31144 O. lucimarinus v2.0 123424778 squalene synthase 1 1 5275 Viridiplantae
Thecc1EG006798t1 T. cacao v1.1 123424778 squalene synthase 1 1 5275 Viridiplantae
Migut.N01273.1.p M. guttatus v2.0 123424778 squalene synthase 1 2 5275 Viridiplantae
Migut.B00185.1.p M. guttatus v2.0 123424778 squalene synthase 1 2 5275 Viridiplantae
Araha.10294s0012.1.p A. halleri v1.1 123424778 squalene synthase 1 1 5275 Viridiplantae
Cagra.2350s0014.1.p C. grandiflora v1.1 123424778 squalene synthase 1 1 5275 Viridiplantae
Glyma.11G112000.1.p G. max Wm82.a2.v1 123424778 squalene synthase 1 2 5275 Viridiplantae
Glyma.12G038200.1.p G. max Wm82.a2.v1 123424778 squalene synthase 1 2 5275 Viridiplantae
Brara.K00336.1.p B. rapa FPsc v1.3 123424778 squalene synthase 1 3 5275 Viridiplantae
Brara.H01190.1.p B. rapa FPsc v1.3 123424778 squalene synthase 1 3 5275 Viridiplantae
Brara.A00359.1.p B. rapa FPsc v1.3 123424778 squalene synthase 1 3 5275 Viridiplantae
Bostr.7867s1325.1.p B. stricta v1.2 123424778 squalene synthase 1 1 5275 Viridiplantae
Cre03.g175250.t2.1 C. reinhardtii v5.6 123424778 squalene synthase 1 1 5275 Viridiplantae
Medtr4g071520.1 M. truncatula Mt4.0v1 123424778 squalene synthase 1 1 5275 Viridiplantae
SapurV1A.0091s0310.1.p S. purpurea v1.0 123424778 squalene synthase 1 2 5275 Viridiplantae
SapurV1A.0379s0070.1.p S. purpurea v1.0 123424778 squalene synthase 1 2 5275 Viridiplantae