GO Term : GO:0006367 transcription initiation from RNA polymerase II promoter GO

Namespace:  biological_process Obsolete:  false
description  Any process involved in the assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. Promoter clearance, or release, is the transition between the initiation and elongation phases of transcription.

0 Cross References

1 Data Sets

Name URL
InterPro domain GO annotations  

1 Ontology

Name
GO

10158 Ontology Annotations

Class GO Term Gene Name Db
OntologyAnnotation GO:0006367 111128 GO
GOAnnotation GO:0006367 111128  
GOAnnotation GO:0006367 114128  
OntologyAnnotation GO:0006367 114128 GO
OntologyAnnotation GO:0006367 437207 GO
GOAnnotation GO:0006367 437207  
OntologyAnnotation GO:0006367 231485 GO
GOAnnotation GO:0006367 231485  
OntologyAnnotation GO:0006367 93288 GO
GOAnnotation GO:0006367 93288  
GOAnnotation GO:0006367 430900  
OntologyAnnotation GO:0006367 430900 GO
GOAnnotation GO:0006367 148911  
OntologyAnnotation GO:0006367 148911 GO
OntologyAnnotation GO:0006367 107428 GO
GOAnnotation GO:0006367 107428  
OntologyAnnotation GO:0006367 107911 GO
GOAnnotation GO:0006367 107911  
GOAnnotation GO:0006367 233015  
OntologyAnnotation GO:0006367 233015 GO
OntologyAnnotation GO:0006367 evm.TU.contig_30482.1 GO
GOAnnotation GO:0006367 evm.TU.contig_30482  
GOAnnotation GO:0006367 evm.TU.supercontig_119.63  
OntologyAnnotation GO:0006367 evm.model.supercontig_119.63 GO
GOAnnotation GO:0006367 evm.TU.supercontig_140.6  
OntologyAnnotation GO:0006367 evm.model.supercontig_140.6 GO
GOAnnotation GO:0006367 evm.TU.supercontig_162.37  
OntologyAnnotation GO:0006367 evm.model.supercontig_162.37 GO
GOAnnotation GO:0006367 evm.TU.supercontig_21.43  
OntologyAnnotation GO:0006367 evm.model.supercontig_21.43 GO

33 Parents

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0006352 DNA-templated transcription, initiation Any process involved in the assembly of the RNA polymerase preinitiation complex (PIC) at the core promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. The initiation phase ends just before and does not include promoter clearance, or release, which is the transition between the initiation and elongation phases of transcription.
GO:0044237 cellular metabolic process The chemical reactions and pathways by which individual cells transform chemical substances.
GO:0006367 transcription initiation from RNA polymerase II promoter Any process involved in the assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. Promoter clearance, or release, is the transition between the initiation and elongation phases of transcription.
GO:0006351 transcription, DNA-templated The cellular synthesis of RNA on a template of DNA.
GO:0006807 nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO:0006139 nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
GO:0071704 organic substance metabolic process The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.
GO:0044238 primary metabolic process The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
GO:0006725 cellular aromatic compound metabolic process The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
GO:0006366 transcription from RNA polymerase II promoter The synthesis of RNA from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
GO:0016070 RNA metabolic process The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
GO:0044249 cellular biosynthetic process The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.
GO:0009059 macromolecule biosynthetic process The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:0044260 cellular macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0008150 biological_process Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
GO:0090304 nucleic acid metabolic process Any cellular metabolic process involving nucleic acids.
GO:0034641 cellular nitrogen compound metabolic process The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.
GO:1901360 organic cyclic compound metabolic process The chemical reactions and pathways involving organic cyclic compound.
GO:0046483 heterocycle metabolic process The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).
GO:0043170 macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:1901576 organic substance biosynthetic process The chemical reactions and pathways resulting in the formation of an organic substance, any molecular entity containing carbon.
GO:0034645 cellular macromolecule biosynthetic process The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, carried out by individual cells.
GO:0044271 cellular nitrogen compound biosynthetic process The chemical reactions and pathways resulting in the formation of organic and inorganic nitrogenous compounds.
GO:0097659 nucleic acid-templated transcription The cellular synthesis of RNA on a template of nucleic acid (DNA or RNA).
GO:1901362 organic cyclic compound biosynthetic process The chemical reactions and pathways resulting in the formation of organic cyclic compound.
GO:0034654 nucleobase-containing compound biosynthetic process The chemical reactions and pathways resulting in the formation of nucleobases, nucleosides, nucleotides and nucleic acids.
GO:0010467 gene expression The process in which a gene's sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.

84 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
part of GO:0006367 GO:0001074
part of GO:0006367 GO:0001075
part of GO:0006367 GO:0001113
part of GO:0006367 GO:0001128
part of GO:0006367 GO:0001129
part of GO:0006367 GO:0001136
part of GO:0006367 GO:0001137
part of GO:0006367 GO:0001138
part of GO:0006367 GO:0001139
part of GO:0006367 GO:0001174
regulates GO:0006367 GO:0001177
regulates GO:0006367 GO:0001178
is_a GO:0006352 GO:0006367
part of GO:0006366 GO:0006367
part of GO:0006725 GO:0006367
is_a GO:0008150 GO:0006367
is_a GO:0090304 GO:0006367
is_a GO:0044249 GO:0006367
is_a GO:0071704 GO:0006367
part of GO:0006807 GO:0006367
part of GO:0097659 GO:0006367
is_a GO:0034641 GO:0006367
part of GO:0032774 GO:0006367
is_a GO:0006807 GO:0006367
part of GO:0010467 GO:0006367
part of GO:0071704 GO:0006367
part of GO:0008152 GO:0006367
is_a GO:0006725 GO:0006367
part of GO:0008150 GO:0006367
part of GO:0034641 GO:0006367

1 Synonyms

Name Type
transcription initiation from Pol II promoter synonym