Gene : Medtr2g013430 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 Description:  protein silencing defective protein
Genomic Order:  539 Name:  ? Medtr2g013430
Secondary Identifier:  ? PAC:31063033
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g013430 0.5kb upstream 0.5kb upstream 6377 true chr2: 3610051-3616427 Medicago truncatula
Medtr2g013430 0.5kb upstream 0.5kb upstream 500 false chr2: 3610051-3610550 Medicago truncatula
Medtr2g013430 0.5kb downstream 0.5kb downstream 6377 true chr2: 3610551-3616927 Medicago truncatula
Medtr2g013430 0.5kb downstream 0.5kb downstream 500 false chr2: 3616428-3616927 Medicago truncatula
Medtr2g013430 1.0kb upstream 1.0kb upstream 6877 true chr2: 3609551-3616427 Medicago truncatula
Medtr2g013430 1.0kb upstream 1.0kb upstream 1000 false chr2: 3609551-3610550 Medicago truncatula
Medtr2g013430 1.0kb downstream 1.0kb downstream 6877 true chr2: 3610551-3617427 Medicago truncatula
Medtr2g013430 1.0kb downstream 1.0kb downstream 1000 false chr2: 3616428-3617427 Medicago truncatula
Medtr2g013430 2.0kb upstream 2.0kb upstream 7877 true chr2: 3608551-3616427 Medicago truncatula
Medtr2g013430 2.0kb upstream 2.0kb upstream 2000 false chr2: 3608551-3610550 Medicago truncatula
Medtr2g013430 2.0kb downstream 2.0kb downstream 7877 true chr2: 3610551-3618427 Medicago truncatula
Medtr2g013430 2.0kb downstream 2.0kb downstream 2000 false chr2: 3616428-3618427 Medicago truncatula
Medtr2g013430 5.0kb upstream 5.0kb upstream 10877 true chr2: 3605551-3616427 Medicago truncatula
Medtr2g013430 5.0kb upstream 5.0kb upstream 5000 false chr2: 3605551-3610550 Medicago truncatula
Medtr2g013430 5.0kb downstream 5.0kb downstream 10877 true chr2: 3610551-3621427 Medicago truncatula
Medtr2g013430 5.0kb downstream 5.0kb downstream 5000 false chr2: 3616428-3621427 Medicago truncatula
Medtr2g013430 10.0kb upstream 10.0kb upstream 15877 true chr2: 3600551-3616427 Medicago truncatula
Medtr2g013430 10.0kb upstream 10.0kb upstream 10000 false chr2: 3600551-3610550 Medicago truncatula
Medtr2g013430 10.0kb downstream 10.0kb downstream 15877 true chr2: 3610551-3626427 Medicago truncatula
Medtr2g013430 10.0kb downstream 10.0kb downstream 10000 false chr2: 3616428-3626427 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302886 5265 Fabidae View MSA
124066526 5270 Rosid View MSA
123744370 5271 Pentapetalae View MSA
122786444 5272 Eudicot View MSA
122050833 5273 Angiosperm View MSA
121348139 5274 Embryophyte View MSA
123428671 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.213        
cufflinks 1.803       High
cufflinks 1.192        
cufflinks 0.416       Low
cufflinks 1.467        
cufflinks 0.343       Low
cufflinks 0.83        
cufflinks 1.032        
cufflinks 1.2        

0 Strain