Gene : Glyma.18G242400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23012//PTHR23012:SF100 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  2424
Name:  ? Glyma.18G242400 Secondary Identifier:  ? PAC:30555300
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G242400 0.5kb upstream 0.5kb upstream 4869 true Chr18: 53073442-53078310 Glycine max
Glyma.18G242400 0.5kb upstream 0.5kb upstream 500 false Chr18: 53073442-53073941 Glycine max
Glyma.18G242400 0.5kb downstream 0.5kb downstream 4869 true Chr18: 53073942-53078810 Glycine max
Glyma.18G242400 0.5kb downstream 0.5kb downstream 500 false Chr18: 53078311-53078810 Glycine max
Glyma.18G242400 1.0kb upstream 1.0kb upstream 5369 true Chr18: 53072942-53078310 Glycine max
Glyma.18G242400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 53072942-53073941 Glycine max
Glyma.18G242400 1.0kb downstream 1.0kb downstream 5369 true Chr18: 53073942-53079310 Glycine max
Glyma.18G242400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 53078311-53079310 Glycine max
Glyma.18G242400 2.0kb upstream 2.0kb upstream 6369 true Chr18: 53071942-53078310 Glycine max
Glyma.18G242400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 53071942-53073941 Glycine max
Glyma.18G242400 2.0kb downstream 2.0kb downstream 6369 true Chr18: 53073942-53080310 Glycine max
Glyma.18G242400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 53078311-53080310 Glycine max
Glyma.18G242400 5.0kb upstream 5.0kb upstream 9369 true Chr18: 53068942-53078310 Glycine max
Glyma.18G242400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 53068942-53073941 Glycine max
Glyma.18G242400 5.0kb downstream 5.0kb downstream 9369 true Chr18: 53073942-53083310 Glycine max
Glyma.18G242400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 53078311-53083310 Glycine max
Glyma.18G242400 10.0kb upstream 10.0kb upstream 14369 true Chr18: 53063942-53078310 Glycine max
Glyma.18G242400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 53063942-53073941 Glycine max
Glyma.18G242400 10.0kb downstream 10.0kb downstream 14369 true Chr18: 53073942-53088310 Glycine max
Glyma.18G242400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 53078311-53088310 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316109 5265 Fabidae View MSA
124070525 5270 Rosid View MSA
123751414 5271 Pentapetalae View MSA
122787187 5272 Eudicot View MSA
122048569 5273 Angiosperm View MSA
121311024 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.016413 0.0 0.0798212 Low  
cufflinks 0.0212585 0.0 0.104324 Low  
cufflinks 0.162454 0.0 0.63938 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.75143 0.0 21.7792   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.007     Low  
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.066     Low High
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain