Gene : Glyma.17G192400 G. max Wm82.a2.v1

Defline:  (1 of 39) PTHR23227//PTHR23227:SF41 - BUCENTAUR RELATED Genomic Order:  1924
Name:  ? Glyma.17G192400 Secondary Identifier:  ? PAC:30481500

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G192400 0.5kb upstream 0.5kb upstream 1726   true Chr17: 27624882-27626607 Glycine max
Glyma.17G192400 0.5kb upstream 0.5kb upstream 500   false Chr17: 27624882-27625381 Glycine max
Glyma.17G192400 0.5kb downstream 0.5kb downstream 1726   true Chr17: 27625382-27627107 Glycine max
Glyma.17G192400 0.5kb downstream 0.5kb downstream 500   false Chr17: 27626608-27627107 Glycine max
Glyma.17G192400 1.0kb upstream 1.0kb upstream 2226   true Chr17: 27624382-27626607 Glycine max
Glyma.17G192400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 27624382-27625381 Glycine max
Glyma.17G192400 1.0kb downstream 1.0kb downstream 2226   true Chr17: 27625382-27627607 Glycine max
Glyma.17G192400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 27626608-27627607 Glycine max
Glyma.17G192400 2.0kb upstream 2.0kb upstream 3226   true Chr17: 27623382-27626607 Glycine max
Glyma.17G192400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 27623382-27625381 Glycine max
Glyma.17G192400 2.0kb downstream 2.0kb downstream 3226   true Chr17: 27625382-27628607 Glycine max
Glyma.17G192400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 27626608-27628607 Glycine max
Glyma.17G192400 5.0kb upstream 5.0kb upstream 6226   true Chr17: 27620382-27626607 Glycine max
Glyma.17G192400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 27620382-27625381 Glycine max
Glyma.17G192400 5.0kb downstream 5.0kb downstream 6226   true Chr17: 27625382-27631607 Glycine max
Glyma.17G192400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 27626608-27631607 Glycine max
Glyma.17G192400 10.0kb upstream 10.0kb upstream 11226   true Chr17: 27615382-27626607 Glycine max
Glyma.17G192400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 27615382-27625381 Glycine max
Glyma.17G192400 10.0kb downstream 10.0kb downstream 11226   true Chr17: 27625382-27636607 Glycine max
Glyma.17G192400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 27626608-27636607 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029712 5273 Angiosperm View MSA
122298731 5265 Fabidae View MSA
124036583 5270 Rosid View MSA
123609892 5271 Pentapetalae View MSA
122644530 5272 Eudicot View MSA
121351164 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0199439 0.0 0.0903331 Low  
cufflinks 0.0464525 0.0 0.195967 Low  
cufflinks 0.0327241 0.0 0.141111 Low  
cufflinks 0.0288095 0.0 0.126065 Low  
cufflinks 0.0327878 0.0 0.142243 Low  
cufflinks 0.0107979 0.0 0.0520797 Low Low
cufflinks 0.073603 0.0 0.30162 Low High
cufflinks 0.00532547 0.0 0.027912 Low Low
cufflinks 0.0233222 0.0 0.104248 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain