Gene : Glyma.08G165700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Genomic Order:  1657
Name:  ? Glyma.08G165700 Secondary Identifier:  ? PAC:30536741
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G165700 0.5kb upstream 0.5kb upstream 4533 true Chr08: 13065806-13070338 Glycine max
Glyma.08G165700 0.5kb upstream 0.5kb upstream 500 false Chr08: 13069839-13070338 Glycine max
Glyma.08G165700 0.5kb downstream 0.5kb downstream 4533 true Chr08: 13065306-13069838 Glycine max
Glyma.08G165700 0.5kb downstream 0.5kb downstream 500 false Chr08: 13065306-13065805 Glycine max
Glyma.08G165700 1.0kb upstream 1.0kb upstream 5033 true Chr08: 13065806-13070838 Glycine max
Glyma.08G165700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13069839-13070838 Glycine max
Glyma.08G165700 1.0kb downstream 1.0kb downstream 5033 true Chr08: 13064806-13069838 Glycine max
Glyma.08G165700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13064806-13065805 Glycine max
Glyma.08G165700 2.0kb upstream 2.0kb upstream 6033 true Chr08: 13065806-13071838 Glycine max
Glyma.08G165700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13069839-13071838 Glycine max
Glyma.08G165700 2.0kb downstream 2.0kb downstream 6033 true Chr08: 13063806-13069838 Glycine max
Glyma.08G165700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13063806-13065805 Glycine max
Glyma.08G165700 5.0kb upstream 5.0kb upstream 9033 true Chr08: 13065806-13074838 Glycine max
Glyma.08G165700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13069839-13074838 Glycine max
Glyma.08G165700 5.0kb downstream 5.0kb downstream 9033 true Chr08: 13060806-13069838 Glycine max
Glyma.08G165700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13060806-13065805 Glycine max
Glyma.08G165700 10.0kb upstream 10.0kb upstream 14033 true Chr08: 13065806-13079838 Glycine max
Glyma.08G165700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13069839-13079838 Glycine max
Glyma.08G165700 10.0kb downstream 10.0kb downstream 14033 true Chr08: 13055806-13069838 Glycine max
Glyma.08G165700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13055806-13065805 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306382 5265 Fabidae View MSA
124067484 5270 Rosid View MSA
123752429 5271 Pentapetalae View MSA
122774553 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2362 0.0 37.7033    
cufflinks 15.2509 0.0 53.9664    
cufflinks 13.8292 0.0 49.1084    
cufflinks 9.4744 0.0 35.014    
cufflinks 7.2232 0.0 28.2527    
cufflinks 48.1943 0.0 192.028 High High
cufflinks 9.32491 0.0 34.1909    
cufflinks 8.61516 0.0 32.2286    
cufflinks 5.28881 0.0 22.0352   Low
cufflinks 3.506        
cufflinks 0.756       Low
cufflinks 2.067        
cufflinks 2.799        
cufflinks 0.885       Low
cufflinks 1.111        
cufflinks 2.449        
cufflinks 8.591     High High
cufflinks 1.287        
cufflinks 3.583        
cufflinks 1.335        
cufflinks 0.847       Low
cufflinks 1.8        
cufflinks 4.073       High
cufflinks 0.776       Low
cufflinks 1.915        
cufflinks 2.383        

0 Strain