Gene : Cagra.3501s0105 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31558:SF1 - F7A19.6 PROTEIN-RELATED Genomic Order:  105
Name:  ? Cagra.3501s0105 Secondary Identifier:  ? PAC:28902366
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0105 0.5kb upstream 0.5kb upstream 2783 true Scaffold3501: 377693-380475 Capsella grandiflora
Cagra.3501s0105 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 377693-378192 Capsella grandiflora
Cagra.3501s0105 0.5kb downstream 0.5kb downstream 2783 true Scaffold3501: 378193-380975 Capsella grandiflora
Cagra.3501s0105 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 380476-380975 Capsella grandiflora
Cagra.3501s0105 1.0kb upstream 1.0kb upstream 3283 true Scaffold3501: 377193-380475 Capsella grandiflora
Cagra.3501s0105 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 377193-378192 Capsella grandiflora
Cagra.3501s0105 1.0kb downstream 1.0kb downstream 3283 true Scaffold3501: 378193-381475 Capsella grandiflora
Cagra.3501s0105 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 380476-381475 Capsella grandiflora
Cagra.3501s0105 2.0kb upstream 2.0kb upstream 4283 true Scaffold3501: 376193-380475 Capsella grandiflora
Cagra.3501s0105 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 376193-378192 Capsella grandiflora
Cagra.3501s0105 2.0kb downstream 2.0kb downstream 4283 true Scaffold3501: 378193-382475 Capsella grandiflora
Cagra.3501s0105 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 380476-382475 Capsella grandiflora
Cagra.3501s0105 5.0kb upstream 5.0kb upstream 7283 true Scaffold3501: 373193-380475 Capsella grandiflora
Cagra.3501s0105 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 373193-378192 Capsella grandiflora
Cagra.3501s0105 5.0kb downstream 5.0kb downstream 7283 true Scaffold3501: 378193-385475 Capsella grandiflora
Cagra.3501s0105 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 380476-385475 Capsella grandiflora
Cagra.3501s0105 10.0kb upstream 10.0kb upstream 12283 true Scaffold3501: 368193-380475 Capsella grandiflora
Cagra.3501s0105 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 368193-378192 Capsella grandiflora
Cagra.3501s0105 10.0kb downstream 10.0kb downstream 12283 true Scaffold3501: 378193-390475 Capsella grandiflora
Cagra.3501s0105 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 380476-390475 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365012 5261 Brassicaceae View MSA
123835531 5264 Brassicales-Malvales View MSA
124341781 5266 SBM View MSA
124248783 5268 Malvidae View MSA
124073265 5270 Rosid View MSA
123751293 5271 Pentapetalae View MSA
122789069 5272 Eudicot View MSA
122042640 5273 Angiosperm View MSA
121348788 5274 Embryophyte View MSA
123427527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain