Protein : Carub.0003s1296.1.p C. rubella v1.1
Secondary Identifier:  PAC:39240792 Organism Name:  Capsella rubella
Length:  601   Name:  Carub.0003s1296.1.p
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SummaryProteinsOther
 

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Proteins

7 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR006195 Domain Aminoacyl-tRNA synthetase, class II
IPR018150 Family Aminoacyl-tRNA synthetase, class II (D/K/N)-like
IPR004364 Domain Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR018149 Domain Lysyl-tRNA synthetase, class II, C-terminal
IPR004365 Domain OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR002313 Family Lysine-tRNA ligase, class II
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0003s1296.1_CDS 1806   scaffold_3: 4477251-4480480 Capsella rubella

30 Ontology Annotations

Ontology Term Db Gene/Protein Name
IPR012340 InterPro Carub.0003s1296.1.p
IPR006195 InterPro Carub.0003s1296.1.p
IPR004365 InterPro Carub.0003s1296.1.p
IPR004364 InterPro Carub.0003s1296.1.p
IPR002313 InterPro Carub.0003s1296.1.p
GO:0006430 GO Carub.0003s1296.1.p
GO:0006418 GO Carub.0003s1296.1.p
GO:0005737 GO Carub.0003s1296.1.p
PF00152 PFAM Carub.0003s1296.1.p
TRNA-CHARGING-PWY Pathway Carub.0003s1296.1.p
PTHR22594:SF20 PANTHER Carub.0003s1296.1.p
PTHR22594 PANTHER Carub.0003s1296.1.p
LYSINE--TRNA-LIGASE-RXN MetaCyc Carub.0003s1296.1.p
K04567 KEGG Carub.0003s1296.1.p
IPR018150 InterPro Carub.0003s1296.1.p
IPR018149 InterPro Carub.0003s1296.1.p
TIGR00499 TIGRFAMs Carub.0003s1296.1.p
SSF55681 SSF Carub.0003s1296.1.p
SSF50249 SSF Carub.0003s1296.1.p
PS50862 PROFILE Carub.0003s1296.1.p
PR00982 PRINTS Carub.0003s1296.1.p
PF01336 PFAM Carub.0003s1296.1.p
GO:0005524 GO Carub.0003s1296.1.p
GO:0004824 GO Carub.0003s1296.1.p
GO:0004812 GO Carub.0003s1296.1.p
GO:0003676 GO Carub.0003s1296.1.p
GO:0000166 GO Carub.0003s1296.1.p
G3DSA:3.30.930.10 GENE3D Carub.0003s1296.1.p
G3DSA:2.40.50.140 GENE3D Carub.0003s1296.1.p
6.1.1.6 ENZYME Carub.0003s1296.1.p

1 Pathway Components

Type Key Level Step
      95

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella TRNA-CHARGING-PWY Capsella rubella pathologic