Protein : Carub.0001s2244.1.p C. rubella v1.1
Secondary Identifier:  PAC:39230047 Organism Name:  Capsella rubella
Length:  502   Name:  Carub.0001s2244.1.p
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SummaryProteinsOther
 
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SummaryProteinsOther
 

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Proteins

6 Protein Domains

DB identifier Type Name
IPR013785 Domain Aldolase-type TIM barrel
IPR029056 Domain Ribokinase-like
IPR011611 Domain Carbohydrate kinase PfkB
IPR004399 Domain Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
IPR003733 Family Thiamine phosphate synthase
IPR022998 Domain Thiamin phosphate synthase superfamily
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0001s2244.1_CDS 1509   scaffold_1: 8105366-8107795 Capsella rubella

30 Ontology Annotations

Ontology Term Db Gene/Protein Name
2.5.1.3 ENZYME Carub.0001s2244.1.p
2.7.1.49 ENZYME Carub.0001s2244.1.p
2.7.4.7 ENZYME Carub.0001s2244.1.p
G3DSA:3.20.20.70 GENE3D Carub.0001s2244.1.p
GO:0009228 GO Carub.0001s2244.1.p
IPR003733 InterPro Carub.0001s2244.1.p
IPR004399 InterPro Carub.0001s2244.1.p
G3DSA:3.40.1190.20 GENE3D Carub.0001s2244.1.p
GO:0003824 GO Carub.0001s2244.1.p
GO:0004789 GO Carub.0001s2244.1.p
GO:0008972 GO Carub.0001s2244.1.p
K14153 KEGG Carub.0001s2244.1.p
OHMETPYRKIN-RXN MetaCyc Carub.0001s2244.1.p
PYRIMSYN3-RXN MetaCyc Carub.0001s2244.1.p
THI-P-SYN-RXN MetaCyc Carub.0001s2244.1.p
IPR011611 InterPro Carub.0001s2244.1.p
IPR013785 InterPro Carub.0001s2244.1.p
IPR022998 InterPro Carub.0001s2244.1.p
IPR029056 InterPro Carub.0001s2244.1.p
PWY-6910 Pathway Carub.0001s2244.1.p
PF00294 PFAM Carub.0001s2244.1.p
PF02581 PFAM Carub.0001s2244.1.p
SSF51391 SSF Carub.0001s2244.1.p
PTHR20858 PANTHER Carub.0001s2244.1.p
PTHR20858:SF17 PANTHER Carub.0001s2244.1.p
PWY-6890 Pathway Carub.0001s2244.1.p
PWY-6908 Pathway Carub.0001s2244.1.p
SSF53613 SSF Carub.0001s2244.1.p
TIGR00097 TIGRFAMs Carub.0001s2244.1.p
TIGR00693 TIGRFAMs Carub.0001s2244.1.p

4 Pathway Components

Type Key Level Step
      7
      8
      11
      8

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6890 Capsella rubella pathologic  
Crubella PWY-6908 Capsella rubella pathologic  
Crubella PWY-6910 Capsella rubella pathologic