Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 124063155

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  27

27 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Cucsa.116130 (1 of 2) KOG0107//KOG0126 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) C. sativus v1.0 4124   scaffold00995: 38808-42931
orange1.1g016463m.g (1 of 4) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) C. sinensis v1.1 4263   scaffold00005: 2771027-2775289
AT5G19960 (1 of 1) KOG0107//KOG0126//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily A. thaliana TAIR10 2414   Chr5: 6743926-6746339
Thhalv10014075m.g (1 of 2) KOG0107//KOG0126 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) E. salsugineum v1.0 2334   scaffold_2: 6889009-6891342
Ciclev10008764m.g (1 of 5) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) C. clementina v1.0 3901   scaffold_1: 5060315-5064215
Lus10017757.g (1 of 2) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily L. usitatissimum v1.0 2869   scaffold212: 409503-412371
Gorai.009G022000 (1 of 1) KOG0107//KOG0126 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) G. raimondii v2.1 3358   Chr09: 1669769-1673126
Thecc1EG037971 (1 of 2) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily T. cacao v1.1 3778   scaffold_9: 6317727-6321504
Araha.13532s0003 (1 of 1) KOG0106//KOG0107//KOG0126//KOG4207 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily A. halleri v1.1 2396   Scaffold13532: 5145-7540
Cagra.1268s0004 (1 of 1) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily C. grandiflora v1.1 2431   Scaffold1268: 11150-13580
Glyma.05G011400 (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. max Wm82.a2.v1 4186   Chr05: 1012793-1016978
Glyma.17G119500 (1 of 7) KOG0121 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) G. max Wm82.a2.v1 4300   Chr17: 9452726-9457025
Brara.B00855 (1 of 14) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) B. rapa FPsc v1.3 2398   A02: 4043267-4045664
Brara.C00901 (1 of 340) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. rapa FPsc v1.3 7973   A03: 4217928-4225900
Bostr.26527s0204 (1 of 1) KOG0107//KOG0126//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily B. stricta v1.2 2551   Scaffold26527: 1310137-1312687
SapurV1A.0246s0180 (1 of 2) KOG0107//KOG0126//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Predicted splicing factor, SR protein superfamily S. purpurea v1.0 9763   chr18: 7435360-7445122
Prupe.7G236000 (1 of 7) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) P. persica v2.1 3100   Pp07: 20503878-20506977
Manes.14G127600 (1 of 2) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily M. esculenta v6.1 6006   Chromosome14: 11379600-11385605
AL6G31490 (1 of 1) KOG0106//KOG0107//KOG0126 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) A. lyrata v2.1 2618   scaffold_6: 8428377-8430994
Phvul.003G159900 (1 of 252) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) P. vulgaris v2.1 4706   Chr03: 37773913-37778618
Potri.018G074100 (1 of 1) KOG0107//KOG0126 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) P. trichocarpa v3.1 9021   Chr18: 9700975-9709995
Podel.18G071800 (1 of 15) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) P. deltoides WV94 v2.1 9571   Chr18: 9494755-9504325
VIT_211s0016g04610 (1 of 2) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily V. vinifera v2.1 10799   chr11: 3917245-3928043
Carub.0006s1833 (1 of 9) KOG4207 - Predicted splicing factor, SR protein superfamily C. rubella v1.1 2473   scaffold_6: 6771571-6774043
MD15G1180600 (1 of 7) KOG4207 - Predicted splicing factor, SR protein superfamily M. domestica v1.1 2971   Chr15: 14199556-14202526
MD02G1039700 (1 of 3) KOG0121 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) M. domestica v1.1 2719   Chr02: 3226159-3228877
gene30954-v2.0.a2-hybrid (1 of 3) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily F. vesca v2.0.a2 3538   Fvb1: 2161102-2164639

27 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10014075m E. salsugineum v1.0 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Ciclev10008764m C. clementina v1.0 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Gorai.009G022000.1 G. raimondii v2.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Brara.B00855.1.p B. rapa FPsc v1.3 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Prupe.7G236000.1.p P. persica v2.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Manes.14G127600.1.p M. esculenta v6.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Phvul.003G159900.1.p P. vulgaris v2.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Potri.018G074100.2.p P. trichocarpa v3.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Podel.18G071800.1.p P. deltoides WV94 v2.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
VIT_211s0016g04610.1 V. vinifera v2.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Carub.0006s1833.1.p C. rubella v1.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
MD02G1039700 M. domestica v1.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Cucsa.116130.1 C. sativus v1.0 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
orange1.1g016463m C. sinensis v1.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
AT5G19960.1 A. thaliana TAIR10 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Lus10017757 L. usitatissimum v1.0 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Thecc1EG037971t1 T. cacao v1.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Araha.13532s0003.1.p A. halleri v1.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Cagra.1268s0004.1.p C. grandiflora v1.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Glyma.17G119500.1.p G. max Wm82.a2.v1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Glyma.05G011400.1.p G. max Wm82.a2.v1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Brara.C00901.1.p B. rapa FPsc v1.3 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Bostr.26527s0204.1.p B. stricta v1.2 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
SapurV1A.0246s0180.1.p S. purpurea v1.0 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
AL6G31490.t1 A. lyrata v2.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
MD15G1180600 M. domestica v1.1 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
gene30954-v2.0.a2-hybrid.t1 F. vesca v2.0.a2 124063155 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid