Protein Family : squalene synthase 1 122787825

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  52
Paste the following link

52 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30131.t000268 (1 of 1) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) R. communis v0.1 8291   30131: 1652982-1661272
Cucsa.109210 (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase C. sativus v1.0 5487   scaffold00934: 122945-128431
orange1.1g015087m.g (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase C. sinensis v1.1 8097   scaffold00474: 15032-23128
AT4G34640 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase A. thaliana TAIR10 SQS1 3645   Chr4: 16538282-16541926
Thhalv10025338m.g (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase E. salsugineum v1.0 3815   scaffold_1: 2285479-2289293
Ciclev10028537m.g (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase C. clementina v1.0 7446   scaffold_8: 6315013-6322458
Lus10017499.g (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase L. usitatissimum v1.0 4189   scaffold1253: 258275-262463
Lus10028786.g (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase L. usitatissimum v1.0 4387   scaffold540: 263541-267927
Gorai.002G004400 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase G. raimondii v2.1 4718   Chr02: 242843-247560
Gorai.005G247700 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase G. raimondii v2.1 5719   Chr05: 62755408-62761126
Thecc1EG006798 (1 of 1) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) T. cacao v1.1 28808   scaffold_2: 3794466-3823273
Migut.N01273 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase M. guttatus v2.0 6174   scaffold_14: 9104942-9111115
Migut.B00185 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase M. guttatus v2.0 6382   scaffold_2: 763941-770322
Araha.10294s0012 (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase A. halleri v1.1 3664   Scaffold10294: 44378-48041
Cagra.2350s0014 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase C. grandiflora v1.1 3771   Scaffold2350: 42430-46200
Glyma.11G112000 (1 of 3) 2.5.1.21 - Squalene synthase / Squalene synthetase G. max Wm82.a2.v1 7144   Chr11: 8534994-8542137
Glyma.12G038200 (1 of 3) 2.5.1.21 - Squalene synthase / Squalene synthetase G. max Wm82.a2.v1 6417   Chr12: 2750945-2757361
Brara.H01190 (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase B. rapa FPsc v1.3 3349   A08: 13438744-13442092
Brara.K00336 (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase B. rapa FPsc v1.3 2432   Scaffold14751: 213149-215580
Brara.A00359 (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase B. rapa FPsc v1.3 4015   A01: 1829667-1833681
Bostr.7867s1325 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase B. stricta v1.2 3765   Scaffold7867: 6733377-6737141
Medtr4g071520 (1 of 2) 2.5.1.21 - Squalene synthase / Squalene synthetase M. truncatula Mt4.0v1 7109   chr4: 27032938-27040046
SapurV1A.0379s0070 (1 of 2) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) S. purpurea v1.0 5748   chr09: 10251729-10257476
SapurV1A.0091s0310 (1 of 2) K00801 - farnesyl-diphosphate farnesyltransferase (FDFT1) S. purpurea v1.0 6053   chr04: 13955637-13961689
Eucgr.G01720 (1 of 3) 2.5.1.21 - Squalene synthase / Squalene synthetase E. grandis v2.0 7948   Chr07: 32944549-32952496
Prupe.8G087000 (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase P. persica v2.1 7511   Pp08: 11991804-11999314
Manes.04G084600 (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase M. esculenta v6.1 10610   Chromosome04: 22211658-22222267
Kalax.0446s0012 (1 of 5) 2.5.1.21 - Squalene synthase / Squalene synthetase K. laxiflora v1.1 5485   scaffold_446: 84755-90239
Kalax.0053s0110 (1 of 5) 2.5.1.21 - Squalene synthase / Squalene synthetase K. laxiflora v1.1 5320   scaffold_53: 820536-825855
Aqcoe6G298700 (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase A. coerulea v3.1 7213   Chr_06: 27945994-27953206

52 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g015087m C. sinensis v1.1 122787825 squalene synthase 1 1 5272 Eudicot
Thhalv10025338m E. salsugineum v1.0 122787825 squalene synthase 1 1 5272 Eudicot
Lus10017499 L. usitatissimum v1.0 122787825 squalene synthase 1 2 5272 Eudicot
Gorai.005G247700.1 G. raimondii v2.1 122787825 squalene synthase 1 2 5272 Eudicot
Thecc1EG006798t1 T. cacao v1.1 122787825 squalene synthase 1 1 5272 Eudicot
Glyma.11G112000.1.p G. max Wm82.a2.v1 122787825 squalene synthase 1 2 5272 Eudicot
Glyma.12G038200.1.p G. max Wm82.a2.v1 122787825 squalene synthase 1 2 5272 Eudicot
Kalax.0053s0110.1.p K. laxiflora v1.1 122787825 squalene synthase 1 2 5272 Eudicot
Kalax.0446s0012.1.p K. laxiflora v1.1 122787825 squalene synthase 1 2 5272 Eudicot
Aqcoe6G298700.1.p A. coerulea v3.1 122787825 squalene synthase 1 1 5272 Eudicot
AL3G33820.t1 A. lyrata v2.1 122787825 squalene synthase 1 2 5272 Eudicot
Tp57577_TGAC_v2_mRNA16778 T. pratense v2 122787825 squalene synthase 1 1 5272 Eudicot
Solyc01g110290.2.1 S. lycopersicum ITAG2.4 122787825 squalene synthase 1 2 5272 Eudicot
AUR62016811-RA C. quinoa v1.0 122787825 squalene synthase 1 2 5272 Eudicot
AUR62016810-RA C. quinoa v1.0 122787825 squalene synthase 1 2 5272 Eudicot
Potri.004G161200.7.p P. trichocarpa v3.1 122787825 squalene synthase 1 2 5272 Eudicot
Podel.04G165100.1.p P. deltoides WV94 v2.1 122787825 squalene synthase 1 2 5272 Eudicot
Oeu008580.1 O. europaea v1.0 122787825 squalene synthase 1 1 5272 Eudicot
Ca_15420 C. arietinum v1.0 122787825 squalene synthase 1 1 5272 Eudicot
HanXRQChr10g0290101 H. annuus r1.2 122787825 squalene synthase 1 2 5272 Eudicot
gene35692-v2.0.a2-hybrid.t1 F. vesca v2.0.a2 122787825 squalene synthase 1 1 5272 Eudicot
30131.m007117 R. communis v0.1 122787825 squalene synthase 1 1 5272 Eudicot
Cucsa.109210.1 C. sativus v1.0 122787825 squalene synthase 1 1 5272 Eudicot
AT4G34640.1 A. thaliana TAIR10 122787825 squalene synthase 1 1 5272 Eudicot
Ciclev10028537m C. clementina v1.0 122787825 squalene synthase 1 1 5272 Eudicot
Lus10028786 L. usitatissimum v1.0 122787825 squalene synthase 1 2 5272 Eudicot
Gorai.002G004400.1 G. raimondii v2.1 122787825 squalene synthase 1 2 5272 Eudicot
Migut.N01273.1.p M. guttatus v2.0 122787825 squalene synthase 1 2 5272 Eudicot
Migut.B00185.1.p M. guttatus v2.0 122787825 squalene synthase 1 2 5272 Eudicot
Araha.10294s0012.1.p A. halleri v1.1 122787825 squalene synthase 1 1 5272 Eudicot