Gene : Lsat_1_v5_gn_9_73040 L. sativa V8
Defline:  (1 of 1) KOG3057 - Cytochrome c oxidase, subunit VIb/COX12 Genomic Order:  2335
Name:  ? Lsat_1_v5_gn_9_73040 Secondary Identifier:  ? PAC:38923983
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3781 Lactuca sativa pathologic  
Lsativa PWY-7279 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_73040 0.5kb upstream 0.5kb upstream 2571   true Lsat_1_v8_lg_9: 95635245-95637815 Lactuca sativa
Lsat_1_v5_gn_9_73040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 95635245-95635744 Lactuca sativa
Lsat_1_v5_gn_9_73040 0.5kb downstream 0.5kb downstream 2571   true Lsat_1_v8_lg_9: 95635745-95638315 Lactuca sativa
Lsat_1_v5_gn_9_73040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 95637816-95638315 Lactuca sativa
Lsat_1_v5_gn_9_73040 1.0kb upstream 1.0kb upstream 3071   true Lsat_1_v8_lg_9: 95634745-95637815 Lactuca sativa
Lsat_1_v5_gn_9_73040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 95634745-95635744 Lactuca sativa
Lsat_1_v5_gn_9_73040 1.0kb downstream 1.0kb downstream 3071   true Lsat_1_v8_lg_9: 95635745-95638815 Lactuca sativa
Lsat_1_v5_gn_9_73040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 95637816-95638815 Lactuca sativa
Lsat_1_v5_gn_9_73040 2.0kb upstream 2.0kb upstream 4071   true Lsat_1_v8_lg_9: 95633745-95637815 Lactuca sativa
Lsat_1_v5_gn_9_73040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 95633745-95635744 Lactuca sativa
Lsat_1_v5_gn_9_73040 2.0kb downstream 2.0kb downstream 4071   true Lsat_1_v8_lg_9: 95635745-95639815 Lactuca sativa
Lsat_1_v5_gn_9_73040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 95637816-95639815 Lactuca sativa
Lsat_1_v5_gn_9_73040 5.0kb upstream 5.0kb upstream 7071   true Lsat_1_v8_lg_9: 95630745-95637815 Lactuca sativa
Lsat_1_v5_gn_9_73040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 95630745-95635744 Lactuca sativa
Lsat_1_v5_gn_9_73040 5.0kb downstream 5.0kb downstream 7071   true Lsat_1_v8_lg_9: 95635745-95642815 Lactuca sativa
Lsat_1_v5_gn_9_73040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 95637816-95642815 Lactuca sativa
Lsat_1_v5_gn_9_73040 10.0kb upstream 10.0kb upstream 12071   true Lsat_1_v8_lg_9: 95625745-95637815 Lactuca sativa
Lsat_1_v5_gn_9_73040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 95625745-95635744 Lactuca sativa
Lsat_1_v5_gn_9_73040 10.0kb downstream 10.0kb downstream 12071   true Lsat_1_v8_lg_9: 95635745-95647815 Lactuca sativa
Lsat_1_v5_gn_9_73040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 95637816-95647815 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121451418 5263 Asterids View MSA
123743678 5271 Pentapetalae View MSA
122770737 5272 Eudicot View MSA
122050829 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain