Gene : Lsat_1_v5_gn_6_37700 L. sativa V8
Defline:  (1 of 1) PTHR12197//PTHR12197:SF145 - SET AND MYND DOMAIN CONTAINING // SET DOMAIN-CONTAINING PROTEIN Genomic Order:  1147
Name:  ? Lsat_1_v5_gn_6_37700 Secondary Identifier:  ? PAC:38937379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_37700 0.5kb upstream 0.5kb upstream 2466   true Lsat_1_v8_lg_6: 51640800-51643265 Lactuca sativa
Lsat_1_v5_gn_6_37700 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 51640800-51641299 Lactuca sativa
Lsat_1_v5_gn_6_37700 0.5kb downstream 0.5kb downstream 2466   true Lsat_1_v8_lg_6: 51641300-51643765 Lactuca sativa
Lsat_1_v5_gn_6_37700 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 51643266-51643765 Lactuca sativa
Lsat_1_v5_gn_6_37700 1.0kb upstream 1.0kb upstream 2966   true Lsat_1_v8_lg_6: 51640300-51643265 Lactuca sativa
Lsat_1_v5_gn_6_37700 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 51640300-51641299 Lactuca sativa
Lsat_1_v5_gn_6_37700 1.0kb downstream 1.0kb downstream 2966   true Lsat_1_v8_lg_6: 51641300-51644265 Lactuca sativa
Lsat_1_v5_gn_6_37700 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 51643266-51644265 Lactuca sativa
Lsat_1_v5_gn_6_37700 2.0kb upstream 2.0kb upstream 3966   true Lsat_1_v8_lg_6: 51639300-51643265 Lactuca sativa
Lsat_1_v5_gn_6_37700 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 51639300-51641299 Lactuca sativa
Lsat_1_v5_gn_6_37700 2.0kb downstream 2.0kb downstream 3966   true Lsat_1_v8_lg_6: 51641300-51645265 Lactuca sativa
Lsat_1_v5_gn_6_37700 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 51643266-51645265 Lactuca sativa
Lsat_1_v5_gn_6_37700 5.0kb upstream 5.0kb upstream 6966   true Lsat_1_v8_lg_6: 51636300-51643265 Lactuca sativa
Lsat_1_v5_gn_6_37700 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 51636300-51641299 Lactuca sativa
Lsat_1_v5_gn_6_37700 5.0kb downstream 5.0kb downstream 6966   true Lsat_1_v8_lg_6: 51641300-51648265 Lactuca sativa
Lsat_1_v5_gn_6_37700 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 51643266-51648265 Lactuca sativa
Lsat_1_v5_gn_6_37700 10.0kb upstream 10.0kb upstream 11966   true Lsat_1_v8_lg_6: 51631300-51643265 Lactuca sativa
Lsat_1_v5_gn_6_37700 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 51631300-51641299 Lactuca sativa
Lsat_1_v5_gn_6_37700 10.0kb downstream 10.0kb downstream 11966   true Lsat_1_v8_lg_6: 51641300-51653265 Lactuca sativa
Lsat_1_v5_gn_6_37700 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 51643266-51653265 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473531 5263 Asterids View MSA
123740092 5271 Pentapetalae View MSA
122789210 5272 Eudicot View MSA
122047445 5273 Angiosperm View MSA
121345734 5274 Embryophyte View MSA
123425197 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain