PhytoMine: Gene 27894.t000027 R. communis v0.1

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
27894.t000027 0.5kb upstream	0.5kb	upstream	2413	true	27894: 390563-392975	Ricinus communis
27894.t000027 0.5kb upstream	0.5kb	upstream	500	false	27894: 390563-391062	Ricinus communis
27894.t000027 0.5kb downstream	0.5kb	downstream	2413	true	27894: 391063-393475	Ricinus communis
27894.t000027 0.5kb downstream	0.5kb	downstream	500	false	27894: 392976-393475	Ricinus communis
27894.t000027 1.0kb upstream	1.0kb	upstream	2913	true	27894: 390063-392975	Ricinus communis
27894.t000027 1.0kb upstream	1.0kb	upstream	1000	false	27894: 390063-391062	Ricinus communis
27894.t000027 1.0kb downstream	1.0kb	downstream	2913	true	27894: 391063-393975	Ricinus communis
27894.t000027 1.0kb downstream	1.0kb	downstream	1000	false	27894: 392976-393975	Ricinus communis
27894.t000027 2.0kb upstream	2.0kb	upstream	3913	true	27894: 389063-392975	Ricinus communis
27894.t000027 2.0kb upstream	2.0kb	upstream	2000	false	27894: 389063-391062	Ricinus communis
27894.t000027 2.0kb downstream	2.0kb	downstream	3913	true	27894: 391063-394975	Ricinus communis
27894.t000027 2.0kb downstream	2.0kb	downstream	2000	false	27894: 392976-394975	Ricinus communis
27894.t000027 5.0kb upstream	5.0kb	upstream	6913	true	27894: 386063-392975	Ricinus communis
27894.t000027 5.0kb upstream	5.0kb	upstream	5000	false	27894: 386063-391062	Ricinus communis
27894.t000027 5.0kb downstream	5.0kb	downstream	6913	true	27894: 391063-397975	Ricinus communis
27894.t000027 5.0kb downstream	5.0kb	downstream	5000	false	27894: 392976-397975	Ricinus communis
27894.t000027 10.0kb upstream	10.0kb	upstream	11913	true	27894: 381063-392975	Ricinus communis
27894.t000027 10.0kb upstream	10.0kb	upstream	10000	false	27894: 381063-391062	Ricinus communis
27894.t000027 10.0kb downstream	10.0kb	downstream	11913	true	27894: 391063-402975	Ricinus communis
27894.t000027 10.0kb downstream	10.0kb	downstream	10000	false	27894: 392976-402975	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
122458673	5262	Malpighiales	View MSA
124251487	5268	Malvidae	View MSA
124061849	5270	Rosid	View MSA
123738727	5271	Pentapetalae	View MSA
122792809	5272	Eudicot	View MSA
122045533	5273	Angiosperm	View MSA
121346970	5274	Embryophyte	View MSA
123424283	5275	Viridiplantae	View MSA

Defline:	(1 of 2) K03627 - putative transcription factor (MBF1)	Genomic Order:	27
Name:	27894.t000027	Secondary Identifier:	PAC:16799437

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Message:	---- Current page: ---- /phytomine/report.do?id=9317921 ---- Current query: ---- <query name="" model="genomic" view="Protein.ontologyAnnotations.ontologyTerm.identifier Protein.ontologyAnnotations.ontologyTerm.ontology.name Protein.ontologyAnnotations.subject.primaryIdentifier" longDescription=""><join path="Protein.ontologyAnnotations.ontologyTerm" style="OUTER"/><join path="Protein.ontologyAnnotations.ontologyTerm.ontology" style="OUTER"/><join path="Protein.ontologyAnnotations.subject" style="OUTER"/><constraint path="Protein.id" op="=" value="114640799"/></query>

Gene : 27894.t000027 R. communis v0.1

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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

Other

0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain