Gene : 28610.t000001 R. communis v0.1
Defline:  (1 of 3) K00797 - spermidine synthase (speE, SRM) Genomic Order:  1
Name:  ? 28610.t000001 Secondary Identifier:  ? PAC:16801232
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis BSUBPOLYAMSYN-PWY Ricinus communis pathologic  
Rcommunis POLYAMINSYN3-PWY Ricinus communis pathologic  
Rcommunis PWY-7528 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
28610.t000001 0.5kb upstream 0.5kb upstream 4116 true 28610: 1802-5917 Ricinus communis
28610.t000001 0.5kb upstream 0.5kb upstream 500 false 28610: 1802-2301 Ricinus communis
28610.t000001 0.5kb downstream 0.5kb downstream 4116 true 28610: 2302-6417 Ricinus communis
28610.t000001 0.5kb downstream 0.5kb downstream 500 false 28610: 5918-6417 Ricinus communis
28610.t000001 1.0kb upstream 1.0kb upstream 4616 true 28610: 1302-5917 Ricinus communis
28610.t000001 1.0kb upstream 1.0kb upstream 1000 false 28610: 1302-2301 Ricinus communis
28610.t000001 1.0kb downstream 1.0kb downstream 4616 true 28610: 2302-6917 Ricinus communis
28610.t000001 1.0kb downstream 1.0kb downstream 1000 false 28610: 5918-6917 Ricinus communis
28610.t000001 2.0kb upstream 2.0kb upstream 5616 true 28610: 302-5917 Ricinus communis
28610.t000001 2.0kb upstream 2.0kb upstream 2000 false 28610: 302-2301 Ricinus communis
28610.t000001 2.0kb downstream 2.0kb downstream 5616 true 28610: 2302-7917 Ricinus communis
28610.t000001 2.0kb downstream 2.0kb downstream 2000 false 28610: 5918-7917 Ricinus communis
28610.t000001 5.0kb upstream 5.0kb upstream 5917 true 28610: 1-5917 Ricinus communis
28610.t000001 5.0kb upstream 5.0kb upstream 2301 false 28610: 1-2301 Ricinus communis
28610.t000001 5.0kb downstream 5.0kb downstream 8616 true 28610: 2302-10917 Ricinus communis
28610.t000001 5.0kb downstream 5.0kb downstream 5000 false 28610: 5918-10917 Ricinus communis
28610.t000001 10.0kb upstream 10.0kb upstream 5917 true 28610: 1-5917 Ricinus communis
28610.t000001 10.0kb upstream 10.0kb upstream 2301 false 28610: 1-2301 Ricinus communis
28610.t000001 10.0kb downstream 10.0kb downstream 13616 true 28610: 2302-15917 Ricinus communis
28610.t000001 10.0kb downstream 10.0kb downstream 10000 false 28610: 5918-15917 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451342 5262 Malpighiales View MSA
124246037 5268 Malvidae View MSA
124061949 5270 Rosid View MSA
123741827 5271 Pentapetalae View MSA
122790008 5272 Eudicot View MSA
122043696 5273 Angiosperm View MSA
121346443 5274 Embryophyte View MSA
123424303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain