Gene : 28543.t000003 R. communis v0.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF61 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // XYLOGALACTURONAN BETA-1,3-XYLOSYLTRANSFERASE Genomic Order:  3
Name:  ? 28543.t000003 Secondary Identifier:  ? PAC:16801065
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-5980 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
28543.t000003 0.5kb upstream 0.5kb upstream 1919 true 28543: 25783-27701 Ricinus communis
28543.t000003 0.5kb upstream 0.5kb upstream 500 false 28543: 25783-26282 Ricinus communis
28543.t000003 0.5kb downstream 0.5kb downstream 1919 true 28543: 26283-28201 Ricinus communis
28543.t000003 0.5kb downstream 0.5kb downstream 500 false 28543: 27702-28201 Ricinus communis
28543.t000003 1.0kb upstream 1.0kb upstream 2419 true 28543: 25283-27701 Ricinus communis
28543.t000003 1.0kb upstream 1.0kb upstream 1000 false 28543: 25283-26282 Ricinus communis
28543.t000003 1.0kb downstream 1.0kb downstream 2419 true 28543: 26283-28701 Ricinus communis
28543.t000003 1.0kb downstream 1.0kb downstream 1000 false 28543: 27702-28701 Ricinus communis
28543.t000003 2.0kb upstream 2.0kb upstream 3419 true 28543: 24283-27701 Ricinus communis
28543.t000003 2.0kb upstream 2.0kb upstream 2000 false 28543: 24283-26282 Ricinus communis
28543.t000003 2.0kb downstream 2.0kb downstream 3419 true 28543: 26283-29701 Ricinus communis
28543.t000003 2.0kb downstream 2.0kb downstream 2000 false 28543: 27702-29701 Ricinus communis
28543.t000003 5.0kb upstream 5.0kb upstream 6419 true 28543: 21283-27701 Ricinus communis
28543.t000003 5.0kb upstream 5.0kb upstream 5000 false 28543: 21283-26282 Ricinus communis
28543.t000003 5.0kb downstream 5.0kb downstream 6419 true 28543: 26283-32701 Ricinus communis
28543.t000003 5.0kb downstream 5.0kb downstream 5000 false 28543: 27702-32701 Ricinus communis
28543.t000003 10.0kb upstream 10.0kb upstream 11419 true 28543: 16283-27701 Ricinus communis
28543.t000003 10.0kb upstream 10.0kb upstream 10000 false 28543: 16283-26282 Ricinus communis
28543.t000003 10.0kb downstream 10.0kb downstream 11419 true 28543: 26283-37701 Ricinus communis
28543.t000003 10.0kb downstream 10.0kb downstream 10000 false 28543: 27702-37701 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122413049 5262 Malpighiales View MSA
124252793 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain