Gene : 60536.t000001 R. communis v0.1
Defline:  (1 of 1) PTHR11476//PTHR11476:SF9 - HISTIDYL-TRNA SYNTHETASE // HISTIDINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  1
Name:  ? 60536.t000001 Secondary Identifier:  ? PAC:16829365
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
60536.t000001 0.5kb upstream 0.5kb upstream 891 true 60536: 1-891 Ricinus communis
60536.t000001 0.5kb upstream 0.5kb upstream 306 false 60536: 1-306 Ricinus communis
60536.t000001 0.5kb downstream 0.5kb downstream 704 true 60536: 307-1010 Ricinus communis
60536.t000001 0.5kb downstream 0.5kb downstream 119 false 60536: 892-1010 Ricinus communis
60536.t000001 1.0kb upstream 1.0kb upstream 891 true 60536: 1-891 Ricinus communis
60536.t000001 1.0kb upstream 1.0kb upstream 306 false 60536: 1-306 Ricinus communis
60536.t000001 1.0kb downstream 1.0kb downstream 704 true 60536: 307-1010 Ricinus communis
60536.t000001 1.0kb downstream 1.0kb downstream 119 false 60536: 892-1010 Ricinus communis
60536.t000001 2.0kb upstream 2.0kb upstream 891 true 60536: 1-891 Ricinus communis
60536.t000001 2.0kb upstream 2.0kb upstream 306 false 60536: 1-306 Ricinus communis
60536.t000001 2.0kb downstream 2.0kb downstream 704 true 60536: 307-1010 Ricinus communis
60536.t000001 2.0kb downstream 2.0kb downstream 119 false 60536: 892-1010 Ricinus communis
60536.t000001 5.0kb upstream 5.0kb upstream 891 true 60536: 1-891 Ricinus communis
60536.t000001 5.0kb upstream 5.0kb upstream 306 false 60536: 1-306 Ricinus communis
60536.t000001 5.0kb downstream 5.0kb downstream 704 true 60536: 307-1010 Ricinus communis
60536.t000001 5.0kb downstream 5.0kb downstream 119 false 60536: 892-1010 Ricinus communis
60536.t000001 10.0kb upstream 10.0kb upstream 891 true 60536: 1-891 Ricinus communis
60536.t000001 10.0kb upstream 10.0kb upstream 306 false 60536: 1-306 Ricinus communis
60536.t000001 10.0kb downstream 10.0kb downstream 704 true 60536: 307-1010 Ricinus communis
60536.t000001 10.0kb downstream 10.0kb downstream 119 false 60536: 892-1010 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779866 5273 Angiosperm View MSA
122447639 5262 Malpighiales Singleton cluster - no MSA
124244810 5268 Malvidae View MSA
123952008 5270 Rosid View MSA
123744374 5271 Pentapetalae View MSA
122771051 5272 Eudicot View MSA
121051502 5274 Embryophyte View MSA
123091588 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain