PhytoMine: Gene 54388.t000002 R. communis v0.1

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Sequence Feature Displayer

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
54388.t000002 0.5kb upstream	0.5kb	upstream	966	true	54388: 1030-1995	Ricinus communis
54388.t000002 0.5kb upstream	0.5kb	upstream	500	false	54388: 1030-1529	Ricinus communis
54388.t000002 0.5kb downstream	0.5kb	downstream	499	true	54388: 1530-2028	Ricinus communis
54388.t000002 0.5kb downstream	0.5kb	downstream	33	false	54388: 1996-2028	Ricinus communis
54388.t000002 1.0kb upstream	1.0kb	upstream	1466	true	54388: 530-1995	Ricinus communis
54388.t000002 1.0kb upstream	1.0kb	upstream	1000	false	54388: 530-1529	Ricinus communis
54388.t000002 1.0kb downstream	1.0kb	downstream	499	true	54388: 1530-2028	Ricinus communis
54388.t000002 1.0kb downstream	1.0kb	downstream	33	false	54388: 1996-2028	Ricinus communis
54388.t000002 2.0kb upstream	2.0kb	upstream	1995	true	54388: 1-1995	Ricinus communis
54388.t000002 2.0kb upstream	2.0kb	upstream	1529	false	54388: 1-1529	Ricinus communis
54388.t000002 2.0kb downstream	2.0kb	downstream	499	true	54388: 1530-2028	Ricinus communis
54388.t000002 2.0kb downstream	2.0kb	downstream	33	false	54388: 1996-2028	Ricinus communis
54388.t000002 5.0kb upstream	5.0kb	upstream	1995	true	54388: 1-1995	Ricinus communis
54388.t000002 5.0kb upstream	5.0kb	upstream	1529	false	54388: 1-1529	Ricinus communis
54388.t000002 5.0kb downstream	5.0kb	downstream	499	true	54388: 1530-2028	Ricinus communis
54388.t000002 5.0kb downstream	5.0kb	downstream	33	false	54388: 1996-2028	Ricinus communis
54388.t000002 10.0kb upstream	10.0kb	upstream	1995	true	54388: 1-1995	Ricinus communis
54388.t000002 10.0kb upstream	10.0kb	upstream	1529	false	54388: 1-1529	Ricinus communis
54388.t000002 10.0kb downstream	10.0kb	downstream	499	true	54388: 1530-2028	Ricinus communis
54388.t000002 10.0kb downstream	10.0kb	downstream	33	false	54388: 1996-2028	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
122413701	5262	Malpighiales	View MSA
124254642	5268	Malvidae	View MSA
124074430	5270	Rosid	View MSA
123753756	5271	Pentapetalae	View MSA
122797794	5272	Eudicot	View MSA
122051419	5273	Angiosperm	View MSA
123429046	5275	Viridiplantae	View MSA
121351195	5274	Embryophyte	View MSA

Defline:	(1 of 3) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2)	Genomic Order:	2
Name:	54388.t000002	Secondary Identifier:	PAC:16828713

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Message:	---- Current page: ---- /phytomine/report.do?id=9214816 ---- Current query: ---- <query name="" model="genomic" view="Protein.ontologyAnnotations.ontologyTerm.identifier Protein.ontologyAnnotations.ontologyTerm.ontology.name Protein.ontologyAnnotations.subject.primaryIdentifier" longDescription=""><join path="Protein.ontologyAnnotations.ontologyTerm" style="OUTER"/><join path="Protein.ontologyAnnotations.ontologyTerm.ontology" style="OUTER"/><join path="Protein.ontologyAnnotations.subject" style="OUTER"/><constraint path="Protein.id" op="=" value="81160635"/></query>

Gene : 54388.t000002 R. communis v0.1

Phytozome Links

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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

Other

0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain