PhytoMine: Gene 54230.t000001 R. communis v0.1

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Sequence Feature Displayer

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
54230.t000001 0.5kb upstream	0.5kb	upstream	1182	true	54230: 164-1345	Ricinus communis
54230.t000001 0.5kb upstream	0.5kb	upstream	155	false	54230: 1191-1345	Ricinus communis
54230.t000001 0.5kb downstream	0.5kb	downstream	1190	true	54230: 1-1190	Ricinus communis
54230.t000001 0.5kb downstream	0.5kb	downstream	163	false	54230: 1-163	Ricinus communis
54230.t000001 1.0kb upstream	1.0kb	upstream	1182	true	54230: 164-1345	Ricinus communis
54230.t000001 1.0kb upstream	1.0kb	upstream	155	false	54230: 1191-1345	Ricinus communis
54230.t000001 1.0kb downstream	1.0kb	downstream	1190	true	54230: 1-1190	Ricinus communis
54230.t000001 1.0kb downstream	1.0kb	downstream	163	false	54230: 1-163	Ricinus communis
54230.t000001 2.0kb upstream	2.0kb	upstream	1182	true	54230: 164-1345	Ricinus communis
54230.t000001 2.0kb upstream	2.0kb	upstream	155	false	54230: 1191-1345	Ricinus communis
54230.t000001 2.0kb downstream	2.0kb	downstream	1190	true	54230: 1-1190	Ricinus communis
54230.t000001 2.0kb downstream	2.0kb	downstream	163	false	54230: 1-163	Ricinus communis
54230.t000001 5.0kb upstream	5.0kb	upstream	1182	true	54230: 164-1345	Ricinus communis
54230.t000001 5.0kb upstream	5.0kb	upstream	155	false	54230: 1191-1345	Ricinus communis
54230.t000001 5.0kb downstream	5.0kb	downstream	1190	true	54230: 1-1190	Ricinus communis
54230.t000001 5.0kb downstream	5.0kb	downstream	163	false	54230: 1-163	Ricinus communis
54230.t000001 10.0kb upstream	10.0kb	upstream	1182	true	54230: 164-1345	Ricinus communis
54230.t000001 10.0kb upstream	10.0kb	upstream	155	false	54230: 1191-1345	Ricinus communis
54230.t000001 10.0kb downstream	10.0kb	downstream	1190	true	54230: 1-1190	Ricinus communis
54230.t000001 10.0kb downstream	10.0kb	downstream	163	false	54230: 1-163	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
121577962	5273	Angiosperm	Singleton cluster - no MSA
122447078	5262	Malpighiales	Singleton cluster - no MSA
124234954	5268	Malvidae	Singleton cluster - no MSA
123950583	5270	Rosid	Singleton cluster - no MSA
123528716	5271	Pentapetalae	Singleton cluster - no MSA
122563705	5272	Eudicot	Singleton cluster - no MSA
120850449	5274	Embryophyte	Singleton cluster - no MSA
122891645	5275	Viridiplantae	Singleton cluster - no MSA

Defline:	(1 of 4) K15033 - peptidyl-tRNA hydrolase ICT1 [EC:3.1.1.29] (ICT1)	Genomic Order:	1
Name:	54230.t000001	Secondary Identifier:	PAC:16828699

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Message:	---- Current page: ---- /phytomine/report.do?id=9214690 ---- Current query: ---- <query name="" model="genomic" view="Protein.ontologyAnnotations.ontologyTerm.identifier Protein.ontologyAnnotations.ontologyTerm.ontology.name Protein.ontologyAnnotations.subject.primaryIdentifier" longDescription=""><join path="Protein.ontologyAnnotations.ontologyTerm" style="OUTER"/><join path="Protein.ontologyAnnotations.ontologyTerm.ontology" style="OUTER"/><join path="Protein.ontologyAnnotations.subject" style="OUTER"/><constraint path="Protein.id" op="=" value="2300493"/></query>

Gene : 54230.t000001 R. communis v0.1

Phytozome Links

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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

Other

0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain