PhytoMine: Gene 31948.t000002 R. communis v0.1

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
31948.t000002 0.5kb upstream	0.5kb	upstream	466	true	31948: 909-1374	Ricinus communis
31948.t000002 0.5kb upstream	0.5kb	upstream	34	false	31948: 1341-1374	Ricinus communis
31948.t000002 0.5kb downstream	0.5kb	downstream	932	true	31948: 409-1340	Ricinus communis
31948.t000002 0.5kb downstream	0.5kb	downstream	500	false	31948: 409-908	Ricinus communis
31948.t000002 1.0kb upstream	1.0kb	upstream	466	true	31948: 909-1374	Ricinus communis
31948.t000002 1.0kb upstream	1.0kb	upstream	34	false	31948: 1341-1374	Ricinus communis
31948.t000002 1.0kb downstream	1.0kb	downstream	1340	true	31948: 1-1340	Ricinus communis
31948.t000002 1.0kb downstream	1.0kb	downstream	908	false	31948: 1-908	Ricinus communis
31948.t000002 2.0kb upstream	2.0kb	upstream	466	true	31948: 909-1374	Ricinus communis
31948.t000002 2.0kb upstream	2.0kb	upstream	34	false	31948: 1341-1374	Ricinus communis
31948.t000002 2.0kb downstream	2.0kb	downstream	1340	true	31948: 1-1340	Ricinus communis
31948.t000002 2.0kb downstream	2.0kb	downstream	908	false	31948: 1-908	Ricinus communis
31948.t000002 5.0kb upstream	5.0kb	upstream	466	true	31948: 909-1374	Ricinus communis
31948.t000002 5.0kb upstream	5.0kb	upstream	34	false	31948: 1341-1374	Ricinus communis
31948.t000002 5.0kb downstream	5.0kb	downstream	1340	true	31948: 1-1340	Ricinus communis
31948.t000002 5.0kb downstream	5.0kb	downstream	908	false	31948: 1-908	Ricinus communis
31948.t000002 10.0kb upstream	10.0kb	upstream	466	true	31948: 909-1374	Ricinus communis
31948.t000002 10.0kb upstream	10.0kb	upstream	34	false	31948: 1341-1374	Ricinus communis
31948.t000002 10.0kb downstream	10.0kb	downstream	1340	true	31948: 1-1340	Ricinus communis
31948.t000002 10.0kb downstream	10.0kb	downstream	908	false	31948: 1-908	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
122444045	5262	Malpighiales	Singleton cluster - no MSA
124231967	5268	Malvidae	Singleton cluster - no MSA
124074912	5270	Rosid	View MSA
123753483	5271	Pentapetalae	View MSA
122794479	5272	Eudicot	View MSA
122049570	5273	Angiosperm	View MSA
121311480	5274	Embryophyte	View MSA
123427881	5275	Viridiplantae	View MSA

Defline:	(1 of 2) 6.2.1.41 - 3-((3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl)propanoate- -CoA ligase / HIP--CoA ligase	Genomic Order:	2
Name:	31948.t000002	Secondary Identifier:	PAC:16825248

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Message:	---- Current page: ---- /phytomine/report.do?id=9185979 ---- Current query: ---- <query name="" model="genomic" view="Exon.gene.primaryIdentifier Exon.gene.briefDescription Exon.gene.organism.shortName Exon.gene.symbol Exon.gene.length Exon.gene.chromosome.primaryIdentifier Exon.gene.chromosomeLocation.start Exon.gene.chromosomeLocation.end" longDescription=""><join path="Exon.gene.organism" style="OUTER"/><join path="Exon.gene.chromosome" style="OUTER"/><join path="Exon.gene.chromosomeLocation" style="OUTER"/><constraint path="Exon.id" op="=" value="363447916"/></query>

Gene : 31948.t000002 R. communis v0.1

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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain