PhytoMine: Gene 30183.t000040 R. communis v0.1

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Sequence Feature Displayer

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
30183.t000040 0.5kb upstream	0.5kb	upstream	5839	true	30183: 1012129-1017967	Ricinus communis
30183.t000040 0.5kb upstream	0.5kb	upstream	500	false	30183: 1012129-1012628	Ricinus communis
30183.t000040 0.5kb downstream	0.5kb	downstream	5839	true	30183: 1012629-1018467	Ricinus communis
30183.t000040 0.5kb downstream	0.5kb	downstream	500	false	30183: 1017968-1018467	Ricinus communis
30183.t000040 1.0kb upstream	1.0kb	upstream	6339	true	30183: 1011629-1017967	Ricinus communis
30183.t000040 1.0kb upstream	1.0kb	upstream	1000	false	30183: 1011629-1012628	Ricinus communis
30183.t000040 1.0kb downstream	1.0kb	downstream	6339	true	30183: 1012629-1018967	Ricinus communis
30183.t000040 1.0kb downstream	1.0kb	downstream	1000	false	30183: 1017968-1018967	Ricinus communis
30183.t000040 2.0kb upstream	2.0kb	upstream	7339	true	30183: 1010629-1017967	Ricinus communis
30183.t000040 2.0kb upstream	2.0kb	upstream	2000	false	30183: 1010629-1012628	Ricinus communis
30183.t000040 2.0kb downstream	2.0kb	downstream	7339	true	30183: 1012629-1019967	Ricinus communis
30183.t000040 2.0kb downstream	2.0kb	downstream	2000	false	30183: 1017968-1019967	Ricinus communis
30183.t000040 5.0kb upstream	5.0kb	upstream	10339	true	30183: 1007629-1017967	Ricinus communis
30183.t000040 5.0kb upstream	5.0kb	upstream	5000	false	30183: 1007629-1012628	Ricinus communis
30183.t000040 5.0kb downstream	5.0kb	downstream	10339	true	30183: 1012629-1022967	Ricinus communis
30183.t000040 5.0kb downstream	5.0kb	downstream	5000	false	30183: 1017968-1022967	Ricinus communis
30183.t000040 10.0kb upstream	10.0kb	upstream	15339	true	30183: 1002629-1017967	Ricinus communis
30183.t000040 10.0kb upstream	10.0kb	upstream	10000	false	30183: 1002629-1012628	Ricinus communis
30183.t000040 10.0kb downstream	10.0kb	downstream	15339	true	30183: 1012629-1027967	Ricinus communis
30183.t000040 10.0kb downstream	10.0kb	downstream	10000	false	30183: 1017968-1027967	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
122459231	5262	Malpighiales	View MSA
124238780	5268	Malvidae	View MSA
124062223	5270	Rosid	View MSA
123738846	5271	Pentapetalae	View MSA
122788362	5272	Eudicot	View MSA
122051079	5273	Angiosperm	View MSA
121346091	5274	Embryophyte	View MSA
123380325	5275	Viridiplantae	View MSA

Defline:	conserved hypothetical protein	Genomic Order:	40
Name:	30183.t000040	Secondary Identifier:	PAC:16822995

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Message:	---- Current page: ---- /phytomine/report.do?id=9155558 ---- Current query: ---- <query name="" model="genomic" view="CDS.transcript.primaryIdentifier CDS.transcript.gene.primaryIdentifier CDS.transcript.chromosome.primaryIdentifier CDS.transcript.chromosomeLocation.start CDS.transcript.chromosomeLocation.end" longDescription=""><join path="CDS.transcript.gene" style="OUTER"/><join path="CDS.transcript.chromosome" style="OUTER"/><join path="CDS.transcript.chromosomeLocation" style="OUTER"/><constraint path="CDS.id" op="=" value="2308724"/></query>

Gene : 30183.t000040 R. communis v0.1

Phytozome Links

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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

Other

0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain