PhytoMine: Gene 30147.t000382 R. communis v0.1

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Sequence Feature Displayer

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
30147.t000382 0.5kb upstream	0.5kb	upstream	2299	true	30147: 4572181-4574479	Ricinus communis
30147.t000382 0.5kb upstream	0.5kb	upstream	500	false	30147: 4573980-4574479	Ricinus communis
30147.t000382 0.5kb downstream	0.5kb	downstream	2299	true	30147: 4571681-4573979	Ricinus communis
30147.t000382 0.5kb downstream	0.5kb	downstream	500	false	30147: 4571681-4572180	Ricinus communis
30147.t000382 1.0kb upstream	1.0kb	upstream	2799	true	30147: 4572181-4574979	Ricinus communis
30147.t000382 1.0kb upstream	1.0kb	upstream	1000	false	30147: 4573980-4574979	Ricinus communis
30147.t000382 1.0kb downstream	1.0kb	downstream	2799	true	30147: 4571181-4573979	Ricinus communis
30147.t000382 1.0kb downstream	1.0kb	downstream	1000	false	30147: 4571181-4572180	Ricinus communis
30147.t000382 2.0kb upstream	2.0kb	upstream	3799	true	30147: 4572181-4575979	Ricinus communis
30147.t000382 2.0kb upstream	2.0kb	upstream	2000	false	30147: 4573980-4575979	Ricinus communis
30147.t000382 2.0kb downstream	2.0kb	downstream	3799	true	30147: 4570181-4573979	Ricinus communis
30147.t000382 2.0kb downstream	2.0kb	downstream	2000	false	30147: 4570181-4572180	Ricinus communis
30147.t000382 5.0kb upstream	5.0kb	upstream	6799	true	30147: 4572181-4578979	Ricinus communis
30147.t000382 5.0kb upstream	5.0kb	upstream	5000	false	30147: 4573980-4578979	Ricinus communis
30147.t000382 5.0kb downstream	5.0kb	downstream	6799	true	30147: 4567181-4573979	Ricinus communis
30147.t000382 5.0kb downstream	5.0kb	downstream	5000	false	30147: 4567181-4572180	Ricinus communis
30147.t000382 10.0kb upstream	10.0kb	upstream	11799	true	30147: 4572181-4583979	Ricinus communis
30147.t000382 10.0kb upstream	10.0kb	upstream	10000	false	30147: 4573980-4583979	Ricinus communis
30147.t000382 10.0kb downstream	10.0kb	downstream	11799	true	30147: 4562181-4573979	Ricinus communis
30147.t000382 10.0kb downstream	10.0kb	downstream	10000	false	30147: 4562181-4572180	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
122456927	5262	Malpighiales	View MSA
124239187	5268	Malvidae	View MSA
124065574	5270	Rosid	View MSA
123753411	5271	Pentapetalae	View MSA
122797924	5272	Eudicot	View MSA
122050358	5273	Angiosperm	View MSA
121349779	5274	Embryophyte	View MSA
123427624	5275	Viridiplantae	View MSA

Defline:	(1 of 1) PTHR12300:SF52 - HVA22-LIKE PROTEIN A-RELATED	Genomic Order:	783
Name:	30147.t000382	Secondary Identifier:	PAC:16820125

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Message:	---- Current page: ---- /phytomine/report.do?id=9100663 ---- Current query: ---- <query name="" model="genomic" view="Protein.ontologyAnnotations.ontologyTerm.identifier Protein.ontologyAnnotations.ontologyTerm.ontology.name Protein.ontologyAnnotations.subject.primaryIdentifier" longDescription=""><join path="Protein.ontologyAnnotations.ontologyTerm" style="OUTER"/><join path="Protein.ontologyAnnotations.ontologyTerm.ontology" style="OUTER"/><join path="Protein.ontologyAnnotations.subject" style="OUTER"/><constraint path="Protein.id" op="=" value="20831384"/></query>

Gene : 30147.t000382 R. communis v0.1

Phytozome Links

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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

Other

0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain