Gene : 30147.t000054 R. communis v0.1
Defline:  (1 of 5) K00134 - glyceraldehyde 3-phosphate dehydrogenase (GAPDH, gapA) Genomic Order:  458
Name:  ? 30147.t000054 Secondary Identifier:  ? PAC:16819800
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis ANAEROFRUCAT-PWY Ricinus communis pathologic  
Rcommunis ANAGLYCOLYSIS-PWY Ricinus communis pathologic  
Rcommunis GLUCONEO-PWY Ricinus communis pathologic  
Rcommunis PWY-1042 Ricinus communis pathologic  
Rcommunis PWY-5464 Ricinus communis pathologic  
Rcommunis PWY66-399 Ricinus communis pathologic  
Rcommunis SUCSYN-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30147.t000054 0.5kb upstream 0.5kb upstream 3464 true 30147: 2585004-2588467 Ricinus communis
30147.t000054 0.5kb upstream 0.5kb upstream 500 false 30147: 2587968-2588467 Ricinus communis
30147.t000054 0.5kb downstream 0.5kb downstream 3464 true 30147: 2584504-2587967 Ricinus communis
30147.t000054 0.5kb downstream 0.5kb downstream 500 false 30147: 2584504-2585003 Ricinus communis
30147.t000054 1.0kb upstream 1.0kb upstream 3964 true 30147: 2585004-2588967 Ricinus communis
30147.t000054 1.0kb upstream 1.0kb upstream 1000 false 30147: 2587968-2588967 Ricinus communis
30147.t000054 1.0kb downstream 1.0kb downstream 3964 true 30147: 2584004-2587967 Ricinus communis
30147.t000054 1.0kb downstream 1.0kb downstream 1000 false 30147: 2584004-2585003 Ricinus communis
30147.t000054 2.0kb upstream 2.0kb upstream 4964 true 30147: 2585004-2589967 Ricinus communis
30147.t000054 2.0kb upstream 2.0kb upstream 2000 false 30147: 2587968-2589967 Ricinus communis
30147.t000054 2.0kb downstream 2.0kb downstream 4964 true 30147: 2583004-2587967 Ricinus communis
30147.t000054 2.0kb downstream 2.0kb downstream 2000 false 30147: 2583004-2585003 Ricinus communis
30147.t000054 5.0kb upstream 5.0kb upstream 7964 true 30147: 2585004-2592967 Ricinus communis
30147.t000054 5.0kb upstream 5.0kb upstream 5000 false 30147: 2587968-2592967 Ricinus communis
30147.t000054 5.0kb downstream 5.0kb downstream 7964 true 30147: 2580004-2587967 Ricinus communis
30147.t000054 5.0kb downstream 5.0kb downstream 5000 false 30147: 2580004-2585003 Ricinus communis
30147.t000054 10.0kb upstream 10.0kb upstream 12964 true 30147: 2585004-2597967 Ricinus communis
30147.t000054 10.0kb upstream 10.0kb upstream 10000 false 30147: 2587968-2597967 Ricinus communis
30147.t000054 10.0kb downstream 10.0kb downstream 12964 true 30147: 2575004-2587967 Ricinus communis
30147.t000054 10.0kb downstream 10.0kb downstream 10000 false 30147: 2575004-2585003 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122425824 5262 Malpighiales View MSA
124250703 5268 Malvidae View MSA
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain