PhytoMine: Gene 30138.t000068 R. communis v0.1

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
30138.t000068 0.5kb upstream	0.5kb	upstream	3520	true	30138: 490547-494066	Ricinus communis
30138.t000068 0.5kb upstream	0.5kb	upstream	500	false	30138: 493567-494066	Ricinus communis
30138.t000068 0.5kb downstream	0.5kb	downstream	3520	true	30138: 490047-493566	Ricinus communis
30138.t000068 0.5kb downstream	0.5kb	downstream	500	false	30138: 490047-490546	Ricinus communis
30138.t000068 1.0kb upstream	1.0kb	upstream	4020	true	30138: 490547-494566	Ricinus communis
30138.t000068 1.0kb upstream	1.0kb	upstream	1000	false	30138: 493567-494566	Ricinus communis
30138.t000068 1.0kb downstream	1.0kb	downstream	4020	true	30138: 489547-493566	Ricinus communis
30138.t000068 1.0kb downstream	1.0kb	downstream	1000	false	30138: 489547-490546	Ricinus communis
30138.t000068 2.0kb upstream	2.0kb	upstream	5020	true	30138: 490547-495566	Ricinus communis
30138.t000068 2.0kb upstream	2.0kb	upstream	2000	false	30138: 493567-495566	Ricinus communis
30138.t000068 2.0kb downstream	2.0kb	downstream	5020	true	30138: 488547-493566	Ricinus communis
30138.t000068 2.0kb downstream	2.0kb	downstream	2000	false	30138: 488547-490546	Ricinus communis
30138.t000068 5.0kb upstream	5.0kb	upstream	8020	true	30138: 490547-498566	Ricinus communis
30138.t000068 5.0kb upstream	5.0kb	upstream	5000	false	30138: 493567-498566	Ricinus communis
30138.t000068 5.0kb downstream	5.0kb	downstream	8020	true	30138: 485547-493566	Ricinus communis
30138.t000068 5.0kb downstream	5.0kb	downstream	5000	false	30138: 485547-490546	Ricinus communis
30138.t000068 10.0kb upstream	10.0kb	upstream	13020	true	30138: 490547-503566	Ricinus communis
30138.t000068 10.0kb upstream	10.0kb	upstream	10000	false	30138: 493567-503566	Ricinus communis
30138.t000068 10.0kb downstream	10.0kb	downstream	13020	true	30138: 480547-493566	Ricinus communis
30138.t000068 10.0kb downstream	10.0kb	downstream	10000	false	30138: 480547-490546	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
122454330	5262	Malpighiales	View MSA
124240017	5268	Malvidae	View MSA
124072513	5270	Rosid	View MSA
123747473	5271	Pentapetalae	View MSA
122794645	5272	Eudicot	View MSA
122051419	5273	Angiosperm	View MSA
123429046	5275	Viridiplantae	View MSA
121351195	5274	Embryophyte	View MSA

Defline:	(1 of 451) PF13041 - PPR repeat family (PPR_2)	Genomic Order:	66
Name:	30138.t000068	Secondary Identifier:	PAC:16819263

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Message:	---- Current page: ---- /phytomine/report.do?id=9083498 ---- Current query: ---- <query name="" model="genomic" view="ProteinFamily.member.protein.primaryIdentifier ProteinFamily.member.protein.organism.shortName ProteinFamily.member.proteinFamily.clusterId ProteinFamily.member.proteinFamily.clusterName ProteinFamily.member.count ProteinFamily.member.proteinFamily.methodId ProteinFamily.member.proteinFamily.methodName" longDescription=""><join path="ProteinFamily.member.protein" style="OUTER"/><join path="ProteinFamily.member.protein.organism" style="OUTER"/><join path="ProteinFamily.member.proteinFamily" style="OUTER"/><constraint path="ProteinFamily.id" op="=" value="-1810056513"/></query>

Gene : 30138.t000068 R. communis v0.1

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Sequence Feature Displayer

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0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain